Academic Journal
Enhancing reproducibility in neuroimaging with containerized archival.
| Τίτλος: | Enhancing reproducibility in neuroimaging with containerized archival. |
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| Συγγραφείς: | Kim ME; Department of Computer Science, Vanderbilt University, Nashville, TN, USA. michael.kim@vanderbilt.edu., Kanakaraj P; Department of Computer Science, Vanderbilt University, Nashville, TN, USA., Liu Y; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA., Schwartz T; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA., Li Z; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA., Newlin NR; Department of Computer Science, Vanderbilt University, Nashville, TN, USA., Gao C; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA., Schilling KG; Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, TN, USA., Bao S; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA., Rogers BP; Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, TN, USA.; Vanderbilt University Institute of Imaging Science, Nashville, TN, USA.; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA.; Department of Psychiatry and Behavioral Sciences, Vanderbilt University Medical Center, Nashville, TN, USA., Landman BA; Department of Computer Science, Vanderbilt University, Nashville, TN, USA.; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA.; Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, TN, USA.; Vanderbilt University Institute of Imaging Science, Nashville, TN, USA.; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA.; Department of Psychiatry and Behavioral Sciences, Vanderbilt University Medical Center, Nashville, TN, USA., Ramadass K; Department of Computer Science, Vanderbilt University, Nashville, TN, USA.; Department of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA. |
| Πηγή: | Brain imaging and behavior [Brain Imaging Behav] 2026 Aug 24; Vol. 20 (5). Date of Electronic Publication: 2026 Aug 24. |
| Τύπος έκδοσης: | Journal Article |
| Γλώσσα: | English |
| Στοιχεία περιοδικού: | Publisher: Springer Country of Publication: United States NLM ID: 101300405 Publication Model: Electronic Cited Medium: Internet ISSN: 1931-7565 (Electronic) Linking ISSN: 19317557 NLM ISO Abbreviation: Brain Imaging Behav Subsets: MEDLINE |
| Imprint Name(s): | Original Publication: Secaucus, NJ : Springer |
| Ιατρικοί όροι (MeSH): | Neuroimaging*/methods , Neuroimaging*/standards, Reproducibility of Results ; Humans |
| Περίληψη: | Ensuring reproducibility in scientific research is crucial for validating findings, advancing knowledge, and fostering trust within the scientific community. Containerization of code is a widespread practice to help ensure reproducibility in neuroimaging research. However, there exists no universal method of sharing containers, nor is it feasible to broadly enforce rules due to the diversity of research practices. We posit that container sharing should include 1.) public availability, 2.) self-contained documentation, and 3.) procedures to ensure consistency of the container and its expected outputs. We demonstrate an approach for publicly releasing three separate containers using Zenodo. Our proposed method fulfills the design criteria for container sharing while incurring minimal overhead. As there are several tools available to distribute and maintain containers already, we discuss available alternatives. (© 2026. The Author(s).) |
| Competing Interests: | Declarations. Clinical trial number: Not applicable. Competing interests: The authors declare no competing interests. |
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| Grant Information: | R01 EB017230 United States EB NIBIB NIH HHS; U01 AG068057 United States AG NIA NIH HHS; K01 EB032898 United States EB NIBIB NIH HHS; U24 AG074855 United States AG NIA NIH HHS; S10 OD023680 United States OD NIH HHS; 1R01EB017230-01A1 United States NH NIH HHS; K01-EB032898 United States NH NIH HHS; R01 AG059716 United States AG NIA NIH HHS; S10 OD020154 United States OD NIH HHS |
| Contributed Indexing: | Keywords: Containerization; Neuroimaging; Reproducibility |
| Entry Date(s): | Date Created: 20260824 Date Completed: 20260824 Latest Revision: 20260827 |
| Update Code: | 20260827 |
| PubMed Central ID: | PMC13503467 |
| DOI: | 10.1007/s11682-026-01191-1 |
| PMID: | 42635871 |
| Βάση Δεδομένων: | MEDLINE |
| ISSN: | 1931-7565 |
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| DOI: | 10.1007/s11682-026-01191-1 |