Academic Journal
Radioactive Springs and Archaeal Life in Deep Groundwater Systems.
| Τίτλος: | Radioactive Springs and Archaeal Life in Deep Groundwater Systems. |
|---|---|
| Συγγραφείς: | Eckertová T; Department of Nuclear Physics and Biophysics, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava, Mlynská Dolina F-1, Bratislava, 841 04, Slovak Republic., Palyzová A; Institute of Microbiology, Czech Academy of Sciences, Vídeňská 1083, Prague, 142 00, Czech Republic., Műllerová M; Department of Nuclear Physics and Biophysics, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava, Mlynská Dolina F-1, Bratislava, 841 04, Slovak Republic., Řezanka T; Institute of Microbiology, Czech Academy of Sciences, Vídeňská 1083, Prague, 142 00, Czech Republic. rezanka@biomed.cas.cz. |
| Πηγή: | Microbial ecology [Microb Ecol] 2026 Mar 14; Vol. 89 (1). Date of Electronic Publication: 2026 Mar 14. |
| Τύπος έκδοσης: | Journal Article |
| Γλώσσα: | English |
| Στοιχεία περιοδικού: | Publisher: Springer-Verlag Country of Publication: United States NLM ID: 7500663 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-184X (Electronic) Linking ISSN: 00953628 NLM ISO Abbreviation: Microb Ecol Subsets: MEDLINE |
| Imprint Name(s): | Original Publication: New York, Springer-Verlag. |
| Ιατρικοί όροι (MeSH): | Archaea*/chemistry , Archaea*/isolation & purification , Archaea*/metabolism , Archaea*/classification , Groundwater*/microbiology , Groundwater*/chemistry , Natural Springs*/microbiology , Natural Springs*/chemistry, Lipids/analysis ; Glyceryl Ethers/analysis ; Lipidomics ; Temperature |
| Περίληψη: | This study investigates the archaeal lipid distribution in freshwater springs with a particular focus on lipidomic profiles as ecological indicaters. Cultivation-independent approaches were employed to analyze organisms that had not yet been cultivated in the laboratory. Shotgun lipidomics of 21 springs in western and central part of Slovakia revealed more than 100 characteristic archaeal lipids, from which three biomarker groups were selected: (i) core lipids containing archaeol and glycerol dialkyl glycerol tetraethers (GDGT), including their mono and dihydroxy derivatives; (ii) mono- to tetra-glycosides of archaeol and GDGTs; and (iii) six phosphoarchaeols (archaeol-based phospholipids). Statistical analyses classified springs into three categories: cold (temperature < 20 °C), warm (> 30 °C), and radioactive (a subset of cold springs with ˃100 Bq/L radioactivity). Significant shifts in the ratios of archaeal lipids were correlated with the temperature and radioactivity, demonstrating the sensitivity of lipidomic profiling to environmental parameters. Moreover, tandem mass spectrometry identified a previously undescribed metabolite, archaeol-based dimethylphosphatidylethanolamine. The applied method provides rapid and highly sensitive tools for screening the presence of archaea, detecting as few as several thousand cells per liter, and offers new insights into the ecology of archaeal communities in groundwater environments. |
| Competing Interests: | Declarations. Competing interests: The authors declare no competing interests. |
| References: | Vengosh A, Coyte RM, Podgorski J, Johnson TM (2022) A critical review on the occurrence and distribution of the uranium- and thorium-decay nuclides and their effect on the quality of groundwater. Sci Total Environ 808:151914. https://doi.org/10.1016/J.SCITOTENV.2021.151914. (PMID: 10.1016/J.SCITOTENV.2021.15191434856287) Missimer TM, Teaf C, Maliva RG et al Natural radiation in the rocks, soils, and groundwater of Southern Florida with a discussion on potential health impacts. Int J Environ Res Public Health 16:1793. https://doi.org/10.3390/ijerph16101793. Sharma DA, Keesari T, Rishi MS et al (2020) Distribution and correlation of radon and uranium and associated hydrogeochemical processes in alluvial aquifers of Northwest India. Environ Sci Pollut Res 27:38901–38915. https://doi.org/10.1007/S11356-020-10015-8. (PMID: 10.1007/S11356-020-10015-8) Cecil LD, Gesell TF (1992) Sampling and analysis for radon-222 dissolved in ground water and surface water. Environ Monit Assess 20:55–66. https://doi.org/10.1007/BF00396521. (PMID: 10.1007/BF0039652124234030) Girault F, Perrier F, Przylibski TA (2018) Radon-222 and radium-226 occurrence in water: A review. Geol Soc Spec Publ 451:131–154. https://doi.org/10.1144/SP451.3. (PMID: 10.1144/SP451.3) Cho BW, Choo CO (2019) Geochemical behavior of uranium and radon in groundwater of jurassic granite area, Icheon, middle Korea. Water (Basel) 11:1278. https://doi.org/10.3390/W11061278. (PMID: 10.3390/W11061278) Řezanka P, Řezanka M, Kyselová L, Řezanka T (2025) Characterization of archaea membrane lipids in radioactive springs using shotgun lipidomics. Folia Microbiol (Praha) 70:225–233. https://doi.org/10.1007/S12223-024-01235-3/METRICS. (PMID: 10.1007/S12223-024-01235-3/METRICS39688758) Wagner C, Mau M, Schlömann M et al (2007) Characterization of the bacterial flora in mineral waters in upstreaming fluids of deep igneous rock aquifers. J Geophys Res Biogeosci 112:1003. https://doi.org/10.1029/2005JG000105. (PMID: 10.1029/2005JG000105) Bräuer K, Kämpf H, Koch U et al (2007) Seismically induced changes of the fluid signature detected by a multi-isotope approach (He, CO2, CH4, N2) at the Wettinquelle, bad Brambach (central Europe). J Geophys Res Solid Earth 112:4307. https://doi.org/10.1029/2006JB004404. (PMID: 10.1029/2006JB004404) Przylibski TA, Mamont-Cieśla K, Kusyk M et al (2004) Radon concentrations in groundwaters of the Polish part of the Sudety mountains (SW Poland). J Environ Radioact 75:193–209. https://doi.org/10.1016/J.JENVRAD.2003.12.004. (PMID: 10.1016/J.JENVRAD.2003.12.00415172727) Lučivjanský L (1997) Prírodná radioaktivita vod Slovenska. In: Radioaktivita v životnom prostředí. Spišská Nová Ves :21–22. Ženišová ZFR (1997) Kvalita Vod Pramenov Bratislavského Lesného Parku. Podzemná Voda 3: 118–126. Blahušiak P, Holý K, Mullerová M, Smetanová I (2017) Radon concentrations in selected thermal waters in Slovakia. Radiat Prot Dosimetry 177:186–189. https://doi.org/10.1093/RPD/NCX161. (PMID: 10.1093/RPD/NCX16129036389) Eckertová T, Müllerová M, Holý K (2019) Radon activity concentration in waters of springs in selected areas of Western Slovakia. Radiat Prot Dosimetry 186:413–418. https://doi.org/10.1093/RPD/NCZ242. (PMID: 10.1093/RPD/NCZ24231832651) Onishchenko A, Zhukovsky M, Veselinovic N, Zunic ZS (2010) Radium-226 concentration in spring water sampled in high radon regions. Appl Radiat Isot 68:825–827. https://doi.org/10.1016/J.APRADISO.2009.09.050. (PMID: 10.1016/J.APRADISO.2009.09.05019853463) Smetanová I, Holý K, Müllerová M et al (2010) Temporal and Spatial changes of radon concentration in borehole water (Little Carpathians Mts., Slovakia). Nat Hazard Earth Sys 10:1373–1377. https://doi.org/10.5194/NHESS-10-1373-2010. (PMID: 10.5194/NHESS-10-1373-2010) Griebler C, Lueders T (2009) Microbial biodiversity in groundwater ecosystems. Freshw Biol 54:649–677. (PMID: 10.1111/j.1365-2427.2008.02013.x) Liu Q, Kämpf H, Bussert R et al (2018) Influence of CO2 degassing on the microbial community in a dry mofette field in Hartoušov, Czech Republic (Western Eger Rift). Front Microbiol 9. https://doi.org/10.3389/fmicb.2018.02787. Ionescu D, Siebert C, Polerecky L et al (2012) Microbial and chemical characterization of underwater fresh water springs in the dead sea. PLoS ONE 7. https://doi.org/10.1371/journal.pone.0038319. Ruiz-GonzálezC, Rodellas V, Garcia-Orellana J (2021) The microbial dimension of submarine groundwater discharge: current challenges and future directions. FEMS Microbiol Rev 45: 1–25 https://doi.org/10.1093/femsre/fuab010. Buriánková I, Molíková A, Vítězová M et al (2022) Microbial communities in underground gas reservoirs offer promising biotechnological potential. Fermentation 8:251. https://doi.org/10.3390/FERMENTATION8060251/S1. (PMID: 10.3390/FERMENTATION8060251/S1) Hanišáková N, Vítězová M, Vítěz T et al (2023) Microbiological insight into various underground gas storages in Vienna basin focusing on methanogenic archaea. Front Microbiol 14:1293506. https://doi.org/10.3389/FMICB.2023.1293506. (PMID: 10.3389/FMICB.2023.12935063818857010771303) Vítězová M, Onderka V, Urbanová I et al (2023) In situ field experiment shows the potential of methanogenic archaea for biomethane production from underground gas storage in natural rock environment. Environ Technol Innov 32:103253. https://doi.org/10.1016/J.ETI.2023.103253. (PMID: 10.1016/J.ETI.2023.103253) Shu WS, Huang LN (2022) Microbial diversity in extreme environments. Nat Rev Microbiol 20:219–235. https://doi.org/10.1038/S41579-021-00648-Y. (PMID: 10.1038/S41579-021-00648-Y34754082) Koga Y, Morii H (2007) Biosynthesis of ether-type Polar lipids in archaea and evolutionary considerations. Microbiol Mol Biol Rev 71:97–120. https://doi.org/10.1128/MMBR.00033-06. (PMID: 10.1128/MMBR.00033-06173475201847378) Li T, Luo Y, Liu C et al (2025) Archaeal lipids: Extraction, Separation, and identification via natural product chemistry perspective. Int J Mol Sci 26: 3167 https://doi.org/10.3390/ijms26073167. Lombard J, López-García P, Moreira D (2012) The early evolution of lipid membranes and the three domains of life. Nat Rev Microbiol 10:507–515. https://doi.org/10.1038/NRMICRO2815. (PMID: 10.1038/NRMICRO281522683881) Sollai M, Villanueva L, Hopmans EC et al (2019) A combined lipidomic and 16S rRNA gene amplicon sequencing approach reveals archaeal sources of intact Polar lipids in the stratified black sea water column. Geobiology 17:91–109. https://doi.org/10.1111/GBI.12316. (PMID: 10.1111/GBI.1231630281902) Řezanka T, Kyselová L, Murphy DJ (2023) Archaeal lipids. Prog Lipid Res 91:101237. https://doi.org/10.1016/j.plipres.2023.101237. (PMID: 10.1016/j.plipres.2023.10123737236370) Caforio A, Driessen AJM (2017) Archaeal phospholipids: structural properties and biosynthesis. Biochim Biophys Acta Mol Cell Biol Lipids 1862:1325–1339. https://doi.org/10.1016/j.bbalip.2016.12.006. (PMID: 10.1016/j.bbalip.2016.12.00628007654) Schouten S, Hopmans EC, Sinninghe Damsté JS (2013) The organic geochemistry of glycerol dialkyl glycerol tetraether lipids: A review. Org Geochem 54:19–61. https://doi.org/10.1016/J.ORGGEOCHEM.2012.09.006. (PMID: 10.1016/J.ORGGEOCHEM.2012.09.006) Law KP, Zhang CL (2019) Current progress and future trends in mass spectrometry-based archaeal lipidomics. Org Geochem 134:45–61. https://doi.org/10.1016/J.ORGGEOCHEM.2019.04.001. (PMID: 10.1016/J.ORGGEOCHEM.2019.04.001) Bligh EG, Dyer WJ (1959) A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37:911–917. https://doi.org/10.1139/O59-099. (PMID: 10.1139/O59-09913671378) Markham JE, Jaworski JG (2007) Rapid measurement of sphingolipids from Arabidopsis Thaliana by reversed-phase high-performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry. Rapid Commun Mass Spectrom 21:1304–1314. https://doi.org/10.1002/RCM.2962. (PMID: 10.1002/RCM.296217340572) Liu XL, Summons RE, Hinrichs KU (2012) Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns. Rapid Commun Mass Spectrom 26:2295–2302. https://doi.org/10.1002/RCM.6355. (PMID: 10.1002/RCM.635522956321) Knappy C, Barillà D, Chong J et al (2015) Mono-, di- and trimethylated homologues of isoprenoid tetraether lipid cores in archaea and environmental samples: mass spectrometric identification and significance. J Mass Spectrom 50:1420–1432. https://doi.org/10.1002/JMS.3709. (PMID: 10.1002/JMS.370926634977) Horai S, Yamauchi N, Naraoka H (2019) Simultaneous total analysis of core and Polar membrane lipids in archaea by high-performance liquid chromatography/high-resolution mass spectrometry coupled with heated electrospray ionization. Rapid Commun Mass Spectrom 33:1571–1577. https://doi.org/10.1002/RCM.8506. (PMID: 10.1002/RCM.850631237975) Pittenauer E, Quehenberger J, Sedlmayr V et al (2024) High-energy CID tandem TOF-MS of various types of precursor ions of selected diether phospholipids: diagnostic known and unexpected fragmentation pathways. Int J Mass Spectrom 499:117237. https://doi.org/10.1016/J.IJMS.2024.117237. (PMID: 10.1016/J.IJMS.2024.117237) Zhang CL, Ye Q, Huang Z et al (2008) Global occurrence of archaeal AmoA genes in terrestrial hot springs. Appl Environ Microbiol 74:6417–6426. https://doi.org/10.1128/AEM.00843-08. (PMID: 10.1128/AEM.00843-08186767032570307) Weimann L, Reinhardt M, Ostertag-Henning C et al (2025) Preservation of archaeal core lipids in siliceous hot spring deposits: an experimental study. Org Geochem 204:104974. https://doi.org/10.1016/J.ORGGEOCHEM.2025.104974. (PMID: 10.1016/J.ORGGEOCHEM.2025.104974) Turich C, Freeman KH (2011) Archaeal lipids record paleosalinity in hypersaline systems. Org Geochem 42:1147–1157. https://doi.org/10.1016/J.ORGGEOCHEM.2011.06.002. (PMID: 10.1016/J.ORGGEOCHEM.2011.06.002) Teixidor P, Grimait JO, Pueyo JJ et al (1993) Isopranylglycerol diethers in non-alkaline evaporitic environments. Geochim Cosmochim Acta 57:4479–4489. https://doi.org/10.1016/0016-7037(93)90497-K. (PMID: 10.1016/0016-7037(93)90497-K) Randlett ME, Bechtel A, van der Meer MTJ, Geochemistry BP et al (2017) Geophys Geosyst 18:571–583. https://doi.org/10.1002/2016GC006621. (PMID: 10.1002/2016GC006621) Oba M, Sakata S, Tsunogai U (2006) Polar and neutral isopranyl glycerol ether lipids as biomarkers of archaea in near-surface sediments from the Nankai trough. Org Geochem 37:1643–1654. https://doi.org/10.1016/J.ORGGEOCHEM.2006.09.002. (PMID: 10.1016/J.ORGGEOCHEM.2006.09.002) Mitrovic D, Hopmans EC, Bale NJ et al (2023) Isoprenoidal GDGTs and GDDs associated with anoxic lacustrine environments. Org Geochem 178:104582. https://doi.org/10.1016/j.orggeochem.2023.104582. (PMID: 10.1016/j.orggeochem.2023.104582) He L, Zhang CL, Dong H et al (2012) Distribution of glycerol dialkyl glycerol tetraethers in Tibetan hot springs. Geosci Front 3:289–300. https://doi.org/10.1016/J.GSF.2011.11.015. (PMID: 10.1016/J.GSF.2011.11.015) Rattanasriampaipong R, Zhang YG, Pearson A et al (2022) Archaeal lipids trace ecology and evolution of marine ammonia-oxidizing archaea. PNAS 119:e2123193119. https://doi.org/10.1073/PNAS.2123193119. (PMID: 10.1073/PNAS.2123193119359053259351445) Geiger O, López-Lara IM, Sohlenkamp C (2013) Phosphatidylcholine biosynthesis and function in bacteria. Biochim Biophys Acta Mol Cell Biol Lipids 1831:503–513. https://doi.org/10.1016/j.bbalip.2012.08.009. (PMID: 10.1016/j.bbalip.2012.08.009) Fang J, Barcelona MJ, Semrau JD (2000) Characterization of methanotrophic bacteria on the basis of intact phospholipid profiles. FEMS Microbiol Lett 189:67–72. https://doi.org/10.1111/J.1574-6968.2000.TB09207.X. (PMID: 10.1111/J.1574-6968.2000.TB09207.X10913867) Dowhan W, Bogdanov M (2021) Eugene P. Kennedy’s legacy: defining bacterial phospholipid pathways and function. Front Mol Biosci 8:666203. https://doi.org/10.3389/FMOLB.2021.666203. (PMID: 10.3389/FMOLB.2021.666203338425548027125) Řezanka T, Palyzová A, Vítová M et al (2022) Structural characterization of mono-and dimethylphosphatidylethanolamines from various organisms using a complex analytical strategy including chiral chromatography. Symmetry (Basel) 14:616. https://doi.org/10.3390/SYM14030616/S1. (PMID: 10.3390/SYM14030616/S1) Zhu R, Evans TW, Wörmer L et al (2013) Improved sensitivity of sedimentary phospholipid analysis resulting from a novel extract cleanup strategy. Org Geochem 65:46–52. https://doi.org/10.1016/J.ORGGEOCHEM.2013.10.002. (PMID: 10.1016/J.ORGGEOCHEM.2013.10.002) Nishihara M, Koga Y (1995) Two new phospholipids, hydroxyarchaetidylglycerol and hydroxyarchaetidylethanolamine, from the archaea methanosarcina barkeri. Biochim biophys acta (BBA) -. Lipid Lipid Metabol 1254:155–160. https://doi.org/10.1016/0005-2760(94)00178-2. (PMID: 10.1016/0005-2760(94)00178-2) Yoshinaga MY, Kellermann MY, Rossel PE et al (2011) Systematic fragmentation patterns of archaeal intact Polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry. Rapid Commun Mass Spectrom 25:3563–3574. https://doi.org/10.1002/RCM.5251. (PMID: 10.1002/RCM.525122095505) Nakamura Y (2021) Headgroup biosynthesis of phosphatidylcholine and phosphatidylethanolamine in seed plants. Prog Lipid Res 82:101091. https://doi.org/10.1016/j.plipres.2021.101091. (PMID: 10.1016/j.plipres.2021.10109133503494) |
| Grant Information: | (VEGA project No. 1/0019/22 Scientific Grant Agency; CZ.02.01.01/00/22_008/0004597 Grant Talking Microbes; APVV-21-0356 Slovak Research and Development Agency; RVO 61388971 Institutional Research Concept |
| Contributed Indexing: | Keywords: Archaea; Groundwater ecology; Mass spectrometry; Microbial communities; Radioactive springs; Shotgun lipidomics |
| Substance Nomenclature: | 0 (Lipids) 0 (Glyceryl Ethers) 0 (archaeol lipid) |
| Entry Date(s): | Date Created: 20260314 Date Completed: 20260627 Latest Revision: 20260627 |
| Update Code: | 20260627 |
| PubMed Central ID: | PMC13032954 |
| DOI: | 10.1007/s00248-026-02720-7 |
| PMID: | 41826531 |
| Βάση Δεδομένων: | MEDLINE |
| ISSN: | 1432-184X |
|---|---|
| DOI: | 10.1007/s00248-026-02720-7 |