Evolution, genomics and epidemiology of Pseudomonas syringae: Challenges in Bacterial Molecular Plant Pathology.

Λεπτομέρειες βιβλιογραφικής εγγραφής
Τίτλος: Evolution, genomics and epidemiology of Pseudomonas syringae: Challenges in Bacterial Molecular Plant Pathology.
Συγγραφείς: Baltrus DA; School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA., McCann HC; New Zealand Institute for Advanced Study, Massey University, Auckland 0632, New Zealand., Guttman DS; Department of Cell and Systems Biology, University of Toronto, Toronto, ON M5S 3B2, Canada.; Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, ON M5S 3B2, Canada.
Πηγή: Molecular plant pathology [Mol Plant Pathol] 2017 Jan; Vol. 18 (1), pp. 152-168. Date of Electronic Publication: 2016 Nov 25.
Τύπος έκδοσης: Journal Article; Review
Γλώσσα: English
Στοιχεία περιοδικού: Publisher: Blackwell Science in collaboration with the British Society of Plant Pathology Country of Publication: England NLM ID: 100954969 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1364-3703 (Electronic) Linking ISSN: 13643703 NLM ISO Abbreviation: Mol Plant Pathol Subsets: MEDLINE
Imprint Name(s): Original Publication: Oxford, UK : Blackwell Science in collaboration with the British Society of Plant Pathology, c2000-
Ιατρικοί όροι (MeSH): Biological Evolution* , Genomics* , Plant Pathology*, Plant Diseases/*microbiology , Plant Diseases/*statistics & numerical data , Pseudomonas syringae/*genetics, Plant Diseases/genetics ; Genetic Variation
Περίληψη: A remarkable shift in our understanding of plant-pathogenic bacteria is underway. Until recently, nearly all research on phytopathogenic bacteria was focused on a small number of model strains, which provided a deep, but narrow, perspective on plant-microbe interactions. Advances in genome sequencing technologies have changed this by enabling the incorporation of much greater diversity into comparative and functional research. We are now moving beyond a typological understanding of a select collection of strains to a more generalized appreciation of the breadth and scope of plant-microbe interactions. The study of natural populations and evolution has particularly benefited from the expansion of genomic data. We are beginning to have a much deeper understanding of the natural genetic diversity, niche breadth, ecological constraints and defining characteristics of phytopathogenic species. Given this expanding genomic and ecological knowledge, we believe the time is ripe to evaluate what we know about the evolutionary dynamics of plant pathogens.
(© 2016 BSPP and John Wiley & Sons Ltd.)
References: Annu Rev Genet. 1999;33:449-77. (PMID: 10690415)
Science. 2000 May 19;288(5469):1251-4. (PMID: 10818002)
Microbiol Mol Biol Rev. 2000 Sep;64(3):624-53. (PMID: 10974129)
Environ Microbiol. 1999 Feb;1(1):75-87. (PMID: 11207720)
Mol Plant Microbe Interact. 2001 Mar;14(3):336-48. (PMID: 11277431)
Nature. 2001 Jun 14;411(6839):826-33. (PMID: 11459065)
Annu Rev Microbiol. 2002;56:457-87. (PMID: 12142474)
Proc Natl Acad Sci U S A. 2004 Mar 2;101(9):3160-5. (PMID: 14973198)
Appl Environ Microbiol. 2004 Apr;70(4):1999-2012. (PMID: 15066790)
J Bacteriol. 2004 Aug;186(15):5101-15. (PMID: 15262947)
J Bacteriol. 2005 Mar;187(6):2113-26. (PMID: 15743960)
Nat Rev Microbiol. 2005 Sep;3(9):733-9. (PMID: 16138101)
Appl Environ Microbiol. 2005 Sep;71(9):5182-91. (PMID: 16151103)
J Bacteriol. 2005 Sep;187(18):6488-98. (PMID: 16159782)
Mol Plant Microbe Interact. 2005 Sep;18(9):991-1001. (PMID: 16167769)
J Theor Biol. 2006 Mar 21;239(2):210-9. (PMID: 16236325)
Appl Environ Microbiol. 1994 Oct;60(10):3790-8. (PMID: 16349417)
Appl Environ Microbiol. 1994 Oct;60(10):3799-808. (PMID: 16349418)
Appl Environ Microbiol. 1994 Dec;60(12):4468-77. (PMID: 16349462)
Proc Natl Acad Sci U S A. 2006 Apr 11;103(15):5887-92. (PMID: 16581904)
J Appl Microbiol. 2006 May;100(5):1073-83. (PMID: 16630008)
Infect Genet Evol. 2007 Jan;7(1):84-92. (PMID: 16807133)
Genome Biol. 2006;7(9):116. (PMID: 17020593)
Philos Trans R Soc Lond B Biol Sci. 2006 Nov 29;361(1475):1917-27. (PMID: 17062411)
Philos Trans R Soc Lond B Biol Sci. 2006 Nov 29;361(1475):2039-44. (PMID: 17062418)
Nature. 2006 Nov 16;444(7117):323-9. (PMID: 17108957)
Appl Environ Microbiol. 2007 Feb;73(4):1287-95. (PMID: 17114318)
Nat Rev Microbiol. 2007 Feb;5(2):152-6. (PMID: 17191075)
Science. 2007 Jan 26;315(5811):476-80. (PMID: 17255503)
Curr Biol. 2007 May 1;17(9):783-8. (PMID: 17442572)
Nat Rev Microbiol. 2007 Aug;5(8):647-51. (PMID: 17603517)
Science. 2007 Aug 24;317(5841):1093-6. (PMID: 17717188)
Syst Biol. 2007 Dec;56(6):879-86. (PMID: 18027281)
Mol Plant Microbe Interact. 2008 Feb;21(2):269-82. (PMID: 18184070)
ISME J. 2008 Mar;2(3):321-34. (PMID: 18185595)
J Bacteriol. 2008 Apr;190(8):2858-70. (PMID: 18263729)
Proc Natl Acad Sci U S A. 2008 Feb 19;105(7):2504-9. (PMID: 18272490)
Mol Microbiol. 2008 May;68(3):672-89. (PMID: 18363647)
Appl Environ Microbiol. 2008 May;74(10):3171-81. (PMID: 18378665)
Nat Rev Microbiol. 2008 Jun;6(6):431-40. (PMID: 18461076)
Phytopathology. 2003 Sep;93(9):1082-92. (PMID: 18944091)
Curr Biol. 2008 Nov 11;18(21):R1024-34. (PMID: 19000803)
Syst Appl Microbiol. 2008 Dec;31(6-8):405-24. (PMID: 19026503)
Genome Res. 2009 May;19(5):744-56. (PMID: 19411599)
Syst Appl Microbiol. 2009 Dec;32(8):533-42. (PMID: 19819658)
Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21748-53. (PMID: 20007373)
Mol Plant Microbe Interact. 2010 Feb;23(2):198-210. (PMID: 20064063)
Syst Appl Microbiol. 2010 Apr;33(3):105-15. (PMID: 20227217)
Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7527-32. (PMID: 20368420)
PLoS Comput Biol. 2010 Apr 01;6(4):e1000732. (PMID: 20369015)
MBio. 2010 Jun 29;1(3):null. (PMID: 20802828)
Clin Microbiol Infect. 2010 Jul;16(7):798-808. (PMID: 20880409)
Nat Genet. 2010 Dec;42(12):1140-3. (PMID: 21037571)
Evolution. 2011 Mar;65(3):818-30. (PMID: 21044058)
Curr Opin Microbiol. 2011 Feb;14(1):24-30. (PMID: 21233007)
Science. 2011 Jan 28;331(6016):430-4. (PMID: 21273480)
Proc Natl Acad Sci U S A. 2011 Mar 22;108(12):5033-8. (PMID: 21383187)
Appl Environ Microbiol. 2011 May;77(10):3202-10. (PMID: 21421777)
Annu Rev Phytopathol. 2011;49:269-89. (PMID: 21568703)
FEMS Microbiol Rev. 2011 Sep;35(5):957-76. (PMID: 21711367)
PLoS Pathog. 2011 Jul;7(7):e1002132. (PMID: 21799664)
Infect Genet Evol. 2011 Oct;11(7):1738-51. (PMID: 21802528)
Nature. 2011 Aug 24;477(7365):462-5. (PMID: 21866102)
PLoS Pathog. 2011 Aug;7(8):e1002130. (PMID: 21901088)
PLoS One. 2011;6(11):e27297. (PMID: 22132095)
ISME J. 2012 Jul;6(7):1325-35. (PMID: 22237542)
Trends Microbiol. 2012 Apr;20(4):199-208. (PMID: 22341410)
PLoS One. 2012;7(5):e36518. (PMID: 22590555)
Appl Environ Microbiol. 2012 Aug;78(16):5529-35. (PMID: 22660707)
J Bacteriol. 2012 Sep;194(18):4810-22. (PMID: 22753062)
Nat Genet. 2012 Sep;44(9):1056-9. (PMID: 22863732)
PLoS Pathog. 2012 Sep;8(9):e1002874. (PMID: 22969423)
Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):577-82. (PMID: 23271803)
Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):2342-7. (PMID: 23324742)
PLoS One. 2013;8(2):e57464. (PMID: 23555547)
Med Mal Infect. 2013 Apr;43(4):146-51. (PMID: 23622953)
Brief Funct Genomics. 2013 Jul;12(4):366-80. (PMID: 23625995)
PLoS Genet. 2013 Apr;9(4):e1003471. (PMID: 23637636)
Annu Rev Phytopathol. 2013;51:85-104. (PMID: 23663005)
New Phytol. 2013 Aug;199(3):800-11. (PMID: 23692644)
Environ Microbiol Rep. 2011 Apr;3(2):203-10. (PMID: 23761252)
Curr Biol. 2013 Jul 8;23(13):1256-60. (PMID: 23810533)
Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):11923-7. (PMID: 23818615)
PLoS Pathog. 2013;9(7):e1003503. (PMID: 23935484)
Mol Ecol. 2014 Mar;23(6):1497-515. (PMID: 24383417)
Genome Announc. 2014 Jan 23;2(1):null. (PMID: 24459267)
PLoS One. 2014 Feb 04;9(2):e87991. (PMID: 24505344)
Nat Genet. 2014 Mar;46(3):305-309. (PMID: 24509479)
Environ Microbiol. 2014 Jul;16(7):2301-15. (PMID: 24612372)
Trends Microbiol. 2014 May;22(5):235-47. (PMID: 24630527)
Plasmid. 2014 May;73:16-25. (PMID: 24792221)
Annu Rev Phytopathol. 2014;52:19-43. (PMID: 24820995)
Genome Biol Evol. 2014 Jun 12;6(6):1514-29. (PMID: 24923323)
Trends Immunol. 2014 Jul;35(7):345-51. (PMID: 24946686)
Mol Plant Pathol. 2015 Feb;16(2):137-49. (PMID: 24986268)
Nature. 2014 Aug 28;512(7515):436-440. (PMID: 25043057)
Am Nat. 2014 Aug;184 Suppl 1:S9-21. (PMID: 25061680)
PLoS One. 2014 Sep 03;9(9):e105547. (PMID: 25184292)
PLoS Genet. 2014 Oct 16;10(10):e1004651. (PMID: 25330091)
Nat Genet. 2015 Jan;47(1):57-64. (PMID: 25401299)
Nat Commun. 2015 Jan 08;6:5975. (PMID: 25569306)
Am J Respir Crit Care Med. 2015 Apr 1;191(7):775-85. (PMID: 25590983)
Mol Plant Pathol. 2015 Oct;16(8):860-9. (PMID: 25649542)
Phytopathology. 2015 May;105(5):597-607. (PMID: 25710204)
PLoS Genet. 2015 Mar 13;11(3):e1005072. (PMID: 25768799)
Mol Biol Evol. 2015 Jul;32(7):1895-906. (PMID: 25771196)
Curr Opin Microbiol. 2015 Jun;25:17-24. (PMID: 25835153)
Trends Ecol Evol. 2015 Jun;30(6):306-13. (PMID: 25887947)
Nat Genet. 2015 Jun;47(6):632-9. (PMID: 25961941)
Annu Rev Phytopathol. 2015;53:157-80. (PMID: 26002289)
Philos Trans R Soc Lond B Biol Sci. 2015 Aug 19;370(1675):null. (PMID: 26150663)
MBio. 2015 Aug 11;6(4):e00452. (PMID: 26265717)
Cell Host Microbe. 2015 Sep 9;18(3):307-19. (PMID: 26299432)
PLoS One. 2015 Aug 27;10(8):e0136101. (PMID: 26313942)
MBio. 2015 Sep 01;6(5):e00981-15. (PMID: 26330513)
Nat Rev Microbiol. 2015 Oct;13(10):605-19. (PMID: 26373371)
Proc Biol Sci. 2015 Dec 22;282(1821):20150488. (PMID: 26702036)
Mol Ecol. 2016 May;25(9):1911-24. (PMID: 26880113)
Mol Plant Microbe Interact. 2016 Apr;29(4):243-6. (PMID: 26883489)
Sci Rep. 2016 Feb 19;6:21399. (PMID: 26891997)
Trends Microbiol. 2016 May;24(5):327-337. (PMID: 26946977)
Trends Microbiol. 2016 Jun;24(6):431-439. (PMID: 26947794)
Methods Ecol Evol. 2016 Jan;7(1):80-89. (PMID: 27110344)
Mol Plant Pathol. 2016 Dec;17(9):1409-1424. (PMID: 27145446)
Microb Genom. 2016 Oct 21;2(10):e000089. (PMID: 28348830)
Plant Dis. 2003 May;87(5):600. (PMID: 30812972)
J Bacteriol. 1970 Jan;101(1):9-23. (PMID: 5411761)
J Appl Bacteriol. 1966 Dec;29(3):470-89. (PMID: 5980915)
Science. 1994 Nov 25;266(5189):1380-3. (PMID: 7973728)
Trends Microbiol. 1994 Mar;2(3):76-81. (PMID: 8156275)
Nature. 1997 Jun 12;387(6634):700-2. (PMID: 9192893)
Nature. 1997 Jun 12;387(6634):703-5. (PMID: 9192894)
Contributed Indexing: Keywords: Pseudomonas syringae; evolution; mutation; natural selection; population structure; recombination; species definition
Entry Date(s): Date Created: 20161101 Date Completed: 20170619 Latest Revision: 20201209
Update Code: 20260130
PubMed Central ID: PMC6638251
DOI: 10.1111/mpp.12506
PMID: 27798954
Βάση Δεδομένων: MEDLINE
Περιγραφή
ISSN:1364-3703
DOI:10.1111/mpp.12506