Conference
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Performance validation of microarray analysis methods

Λεπτομέρειες βιβλιογραφικής εγγραφής
Τίτλος: Performance validation of microarray analysis methods
Συγγραφείς: Danilatou Vasiliki(), Kafetzopoulos Dimitris(), Tsiknakis Manolis(), Blazadonakis Michalis E.(), Ζερβακης Μιχαηλ(http://users.isc.tuc.gr/~mzervakis), Zervakis Michail(http://users.isc.tuc.gr/~mzervakis), Banti Anna()
Στοιχεία εκδότη: Institute of Electrical and Electronics Engineers
Έτος έκδοσης: 2015
Συλλογή: Technical University of Crete: Institutional Repository / Πολυτεχνείο Κρήτης: Ιδρυματικό Αποθετήριο
Θεματικοί όροι: Performance analysis, Filters, Cancer, Biomedical measurements, Genomics, Bioinformatics, Stability, Humans, System testing, Decision support systems
Περιγραφή: Summarization: Following the rapid development of gene selection methods, several comparison studies have been reported for ranking methods on various datasets. In order to reduce bias in performance measures, most studies use an evaluation scheme based on cross-validation. In this paper we focus on the methodology of evaluation itself and address methodological problems using three representative algorithms on two public datasets. More specifically, the paper discusses the need of an independent test-set to reduce bias associated with cross-validation, the use of case specific considerations for generalization, as well as other measures that reflect stability and consistency of the result. Such measures reflect the influence of the actual dataset distribution on the performance of gene selection methods. ; Presented on
Τύπος εγγράφου: conference object
Γλώσσα: English
Relation: info:eu-repo/grantAgreement/EC/FP7/246686; http://purl.tuc.gr/dl/dias/EE40A3CD-624C-4EEB-9EFA-439827AE4C3B
Διαθεσιμότητα: http://purl.tuc.gr/dl/dias/EE40A3CD-624C-4EEB-9EFA-439827AE4C3B
Rights: info:eu-repo/semantics/openAccess ; Όροι χρήσης: Μη διαθέσιμο ; License: http://creativecommons.org/licenses/by/4.0/
Αριθμός Καταχώρησης: edsbas.8326DF9
Βάση Δεδομένων: BASE
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  Availability: 0
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  – Url: http://purl.tuc.gr/dl/dias/EE40A3CD-624C-4EEB-9EFA-439827AE4C3B#
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  Data: Performance validation of microarray analysis methods
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  Data: <searchLink fieldCode="AR" term="%22Danilatou+Vasiliki%28%29%22">Danilatou Vasiliki()</searchLink><br /><searchLink fieldCode="AR" term="%22Kafetzopoulos+Dimitris%28%29%22">Kafetzopoulos Dimitris()</searchLink><br /><searchLink fieldCode="AR" term="%22Tsiknakis+Manolis%28%29%22">Tsiknakis Manolis()</searchLink><br /><searchLink fieldCode="AR" term="%22Blazadonakis+Michalis+E%2E%28%29%22">Blazadonakis Michalis E.()</searchLink><br /><searchLink fieldCode="AR" term="%22Ζερβακης+Μιχαηλ%28http%3A%2F%2Fusers%2Eisc%2Etuc%2Egr%2F~mzervakis%29%22">Ζερβακης Μιχαηλ(http://users.isc.tuc.gr/~mzervakis)</searchLink><br /><searchLink fieldCode="AR" term="%22Zervakis+Michail%28http%3A%2F%2Fusers%2Eisc%2Etuc%2Egr%2F~mzervakis%29%22">Zervakis Michail(http://users.isc.tuc.gr/~mzervakis)</searchLink><br /><searchLink fieldCode="AR" term="%22Banti+Anna%28%29%22">Banti Anna()</searchLink>
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  Data: Institute of Electrical and Electronics Engineers
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  Data: 2015
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  Data: Technical University of Crete: Institutional Repository / Πολυτεχνείο Κρήτης: Ιδρυματικό Αποθετήριο
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  Data: <searchLink fieldCode="DE" term="%22Performance+analysis%22">Performance analysis</searchLink><br /><searchLink fieldCode="DE" term="%22Filters%22">Filters</searchLink><br /><searchLink fieldCode="DE" term="%22Cancer%22">Cancer</searchLink><br /><searchLink fieldCode="DE" term="%22Biomedical+measurements%22">Biomedical measurements</searchLink><br /><searchLink fieldCode="DE" term="%22Genomics%22">Genomics</searchLink><br /><searchLink fieldCode="DE" term="%22Bioinformatics%22">Bioinformatics</searchLink><br /><searchLink fieldCode="DE" term="%22Stability%22">Stability</searchLink><br /><searchLink fieldCode="DE" term="%22Humans%22">Humans</searchLink><br /><searchLink fieldCode="DE" term="%22System+testing%22">System testing</searchLink><br /><searchLink fieldCode="DE" term="%22Decision+support+systems%22">Decision support systems</searchLink>
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  Data: Summarization: Following the rapid development of gene selection methods, several comparison studies have been reported for ranking methods on various datasets. In order to reduce bias in performance measures, most studies use an evaluation scheme based on cross-validation. In this paper we focus on the methodology of evaluation itself and address methodological problems using three representative algorithms on two public datasets. More specifically, the paper discusses the need of an independent test-set to reduce bias associated with cross-validation, the use of case specific considerations for generalization, as well as other measures that reflect stability and consistency of the result. Such measures reflect the influence of the actual dataset distribution on the performance of gene selection methods. ; Presented on
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  Data: info:eu-repo/grantAgreement/EC/FP7/246686; http://purl.tuc.gr/dl/dias/EE40A3CD-624C-4EEB-9EFA-439827AE4C3B
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  Data: http://purl.tuc.gr/dl/dias/EE40A3CD-624C-4EEB-9EFA-439827AE4C3B
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  Data: info:eu-repo/semantics/openAccess ; Όροι χρήσης: Μη διαθέσιμο ; License: http://creativecommons.org/licenses/by/4.0/
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RecordInfo BibRecord:
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    Languages:
      – Text: English
    Subjects:
      – SubjectFull: Performance analysis
        Type: general
      – SubjectFull: Filters
        Type: general
      – SubjectFull: Cancer
        Type: general
      – SubjectFull: Biomedical measurements
        Type: general
      – SubjectFull: Genomics
        Type: general
      – SubjectFull: Bioinformatics
        Type: general
      – SubjectFull: Stability
        Type: general
      – SubjectFull: Humans
        Type: general
      – SubjectFull: System testing
        Type: general
      – SubjectFull: Decision support systems
        Type: general
    Titles:
      – TitleFull: Performance validation of microarray analysis methods
        Type: main
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          Name:
            NameFull: Danilatou Vasiliki()
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            NameFull: Kafetzopoulos Dimitris()
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            NameFull: Tsiknakis Manolis()
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            NameFull: Blazadonakis Michalis E.()
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            NameFull: Ζερβακης Μιχαηλ(http://users.isc.tuc.gr/~mzervakis)
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          Name:
            NameFull: Zervakis Michail(http://users.isc.tuc.gr/~mzervakis)
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          Name:
            NameFull: Banti Anna()
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          Dates:
            – D: 01
              M: 01
              Type: published
              Y: 2015
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