Academic Journal

Strain-Specific DSE Effects on Yam Rhizosphere Carbon Metabolism Are Modulated by Soil Factors.

Λεπτομέρειες βιβλιογραφικής εγγραφής
Τίτλος: Strain-Specific DSE Effects on Yam Rhizosphere Carbon Metabolism Are Modulated by Soil Factors.
Συγγραφείς: Guo J; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China., Su Z; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China., Zhou M; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China., Zuo Y; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China., Wang Y; School of Basic Medical Sciences, Hebei University, Baoding, Hebei, China.
Πηγή: Journal of basic microbiology [J Basic Microbiol] 2026 Aug; Vol. 66 (8), pp. e70191.
Τύπος έκδοσης: Journal Article
Γλώσσα: English
Στοιχεία περιοδικού: Publisher: Wiley-VCH Verlag Country of Publication: Germany NLM ID: 8503885 Publication Model: Print Cited Medium: Internet ISSN: 1521-4028 (Electronic) Linking ISSN: 0233111X NLM ISO Abbreviation: J Basic Microbiol Subsets: MEDLINE
Imprint Name(s): Publication: <2005->: Weinheim, Germany : Wiley-VCH Verlag
Original Publication: Berlin : Akademie-Verlag, [1985-
Ιατρικοί όροι (MeSH): Carbon*/metabolism , Soil*/chemistry , Dioscorea*/microbiology , Dioscorea*/metabolism , Dioscorea*/growth & development , Rhizosphere* , Soil Microbiology*, Plant Roots/microbiology ; Carboxylic Acids/metabolism ; Fungi/metabolism ; Fungi/classification ; Carbohydrate Metabolism ; Hydroxybenzoates
Περίληψη: Rhizosphere microbes are vital for plant growth. Dark septate endophytes (DSE) can enhance host plant adaptability and regulate microbial communities, showing promise for yam soil remediation. This study examined how single and mixed inoculations of eight DSE strains affect yam rhizosphere carbon metabolism. Results showed that rhizosphere microbes preferred carbohydrate and amino acid carbon sources. Single inoculations exhibited relatively high overall metabolic activity, whereas mixed inoculations demonstrated distinct advantages in the utilization of specific carbon sources, such as carbohydrates. Key discriminators were phenolic acid, carboxylic acid, and carbohydrate utilization. Different strains enhanced specific pathways: Pe and Fu improved amine metabolism; Ac and Zo excelled in carbohydrate use; Pl boosted polymer metabolism. Changes in carbon metabolism correlated with soil properties: polymer and amine use with pH and SOC; carbohydrate use with AP; phenolic and carboxylic acid use with AN. Soil properties were also altered strain-specifically. The Pe strain emerged as the prime candidate for mitigating yam continuous cropping obstacles by synergistically improving both carbon metabolism and soil quality. These findings aid in developing biofertilizers and rhizosphere remediation strategies.
(© 2026 Wiley‐VCH GmbH.)
References: H. P. Bais, T. L. Weir, L. G. Perry, S. Gilroy, and J. M. Vivanco, “The Role of Root Exudates in Rhizosphere Interactions with Plants and Other Organisms,” Annual Review of Plant Biology 57, no. 1 (2006): 233–266, https://doi.org/10.1146/annurev.arplant.57.032905.105159.
K. P. Pal and R. Dey, “Interlinking Soil Microbial Diversity and Rhizodeposition for Enhancing Nutrient Uptake and Productivity,” Indian Journal of Plant Genetic Resources 35 (2022): 360–364, https://doi.org/10.5958/0976-1926.2022.00100.0.
M. Keiluweit, J. J. Bougoure, P. S. Nico, J. Pett‐Ridge, P. K. Weber, and M. Kleber, “Mineral Protection of Soil Carbon Counteracted by Root Exudates,” Nature Climate Change 5, no. 6 (2015): 588–595, https://doi.org/10.1038/nclimate2580.
L. Sun, M. Ataka, M. Han, et al., “Root Exudation as a Major Competitive Fine‐Root Functional Trait of 18 Coexisting Species in a Subtropical Forest,” New Phytologist 229, no. 1 (2021): 259–271, https://doi.org/10.1111/nph.16865.
Y. D. Chen, J. F. Du, Y. Li, H. Tang, Z. Yin, L. Yang, et al., “Evolutions and Managements of Soil Microbial Community Structure Drove by Continuous Cropping,” Frontiers in Microbiology 13 (2022): 839494, https://doi.org/10.3389/fmicb.2022.839494.
H. Tang, J. W. Wang, Z. Q. Zeng, et al., “Effects of Continuous Cropping of Flue‐Cured Tobacco on Rhizosphere and Non‐Rhizosphere Soil Nutrients and Their Eco‐Stoichiometric Characteristics,” Journal of Arid Land Resources and Environment 38, no. 10 (2024): 154–165, https://doi.org/10.13448/j.cnki.jalre.2024.214.
H. M. Wu and W. X. Lin, “Acommentary and Development Perspective on the Consecutive Monoculture Problems of Medicinal Plants,” Chinese Journal of Eco‐Agriculture 28, no. 6 (2020): 775–793, https://doi.org/10.19540/j.cnki.cjcmm.20170103.
S. J. Zhu, L. L. Wang, S. Q. Jin, et al., “Alleviating Effect of Microbial Agents and Bacterial Fertilizers on Continuous Cropping Obstacles in Watermelon,” Chinese Agricultural Science Bulletin 39, no. 28 (2023): 48–53.
X. L. Li, W. X. Zhou, X. G. Jiang, et al., “Control Effects of Microbial Fertilizer on Continuous Cropping Obstacles and Violet Root Rot of Codonopsis Tangshen,” Journal of Agricultural Science and Technology 25, no. 3 (2023): 119–131, https://doi.org/10.1128/spectrum.01088-25.
A. Jumpponen and J. M. Trappe, “Dark Septate Endophytes: A Review of Facultative Biotrophic Root‐Colonizing Fungi,” New Phytologist 140, no. 2 (1998): 295–310, https://doi.org/10.1046/j.1469-8137.1998.00265.x.
S. Daghino, E. Martino, S. Voyron, and S. Perotto, “Metabarcoding of Fungal Assemblages in Vaccinium Myrtillus Endosphere Suggests Colonization of Above‐Ground Organs by Some Ericoid Mycorrhizal and DSE Fungi,” Scientific Reports 12, no. 1 (2022): 11013, https://doi.org/10.1038/s41598-022-15154-1.
Y. Bai, D. B. Muller, G. Srinivas, et al., “Functional Overlap of the Arabidopsis Leaf and Root Microbiota,” Nature 528 (2015): 364–369, https://doi.org/10.1038/nature16192.
S. Li, X. J. Shang, Q. X. Luo, Q. Yan, and R. Hou, “Effects of the Dual Inoculation of Dark Septate Endophytes and Trichoderma Koningiopsis on Blueberry Growth and Rhizosphere Soil Microorganisms,” FEMS Microbiology Ecology 99, no. 2 (2023): fiad008, https://doi.org/10.1093/femsec/fiad008.
N. Akhtar, A. K. Wani, D. S. Dhanjal, and S. Mukherjee, “Insights Into the Beneficial Roles of Dark Septate Endophytes in Plants Under Challenging Environment: Resilience to Biotic and Abiotic Stresses,” World Journal of Microbiology and Biotechnology 38, no. 5 (2022): 79, https://doi.org/10.1007/s11274-022-03264-x.
C. He, W. Wang, and J. Hou, “Plant Growth and Soil Microbial Impacts of Enhancing Licorice with Inoculating Dark Septate Endophytes Under Drought Stress,” Frontiers in Microbiology 10 (2019): 2277, https://doi.org/10.3389/fmicb.2019.02277.
H. Chu, H. Wang, Y. Zhang, et al., “Inoculation with Ectomycorrhizal Fungi and Dark Septate Endophytes Contributes to the Resistance of Pinus spp. to Pine Wilt Disease,” Frontiers in Microbiology 12 (2021): 687304, https://doi.org/10.3389/fmicb.2021.687304.
Q. Pang, D. Qu, W. Li, et al., “Muti‐Omics Insights the Enhancement of Drought Tolerance in Sweet Cherry with Dark Septate Endophyte S16,” Plant Physiology and Biochemistry 222 (2025): 109716, https://doi.org/10.1016/j.plaphy.2025.109716.
Q. Luo, R. Hou, X. Shang, and S. Li, “Effects of Phosphorus‐Dissolving Dark Septate Endophytes on the Growth of Blueberry,” Journal of Microbiology 61, no. 9 (2023): 837–851, https://doi.org/10.1007/s12275-023-00080-2.
N. Fierer, “Embracing the Unknown: Disentangling the Complexities of the Soil Microbiome,” Nature Reviews Microbiology 15 (2017): 579–590, https://doi.org/10.1038/nrmicro.2017.87.
N. Fierer, J. W. Leff, B. J. Adams, et al., “Cross‐Biome Metagenomic Analyses of Soil Microbial Communities and Their Functional Attributes,” Proceedings of the National Academy of Sciences of the United States of America 109 (2012): 21390–21395, https://doi.org/10.1073/pnas.1215210110.
Y. N. Tian and H. Q. Wang, “Application of Biolog Method in the Study of Functional Diversity of Environmental Microorganisms,” Environmental Science and Technology 34, no. 3 (2011): 50–57.
J. L. Garland and A. L. Mills, “Classification and Characterization of Heterotrophic Microbial Communities on the Basis of Patterns of Community‐Level Sole‐Carbon‐Source Utilization,” Applied and Environmental Microbiology 57, no. 8 (1991): 2351–2359, https://doi.org/10.1128/aem.57.8.2351-2359.1991.
Z. Ge, H. Du, Y. Gao, and W. Qiu, “Analysis on Metabolic Functions of Stored Rice Microbial Communities by BIOLOG ECO Microplates,” Frontiers in Microbiology 9 (2018): 1375, https://doi.org/10.3389/fmicb.2018.01375.
X. Wang, X. Cao, H. Liu, et al., “Effects of Lactic Acid Bacteria on Microbial Metabolic Functions of Paper Mulberry Silage: A Biolog‐ECO Microplates Approach,” Frontiers in Microbiology 12 (2021): 689174, https://doi.org/10.3389/fmicb.2021.689174.
Z. Huang, Y. Qin, X. He, et al., “Analysis on Metabolic Functions of Rhizosphere Microbial Communities of Pinus massoniana Provenances with Different Carbon Storage by Biolog‐ECO Microplates,” Frontiers in Microbiology 15 (2024): 1365111, https://doi.org/10.3389/fmicb.2024.1365111.
Z. Huang, X. He, C. Zhang, et al., “Microbial Communities and Functions Changed in Rhizosphere Soil of Pinus massoniana Provenances with Different Carbon Storage,” Frontiers in Microbiology 14 (2023): 1264670, https://doi.org/10.3389/fmicb.2023.1264670.
T. Zhou, S. Wu, M. Gao, and L. Yang, “The Heterogeneous Habitat of Taiga Forests Changes the Soil Microbial Functional Diversity,” Microorganisms 12, no. 5 (2024): 959, https://doi.org/10.3390/microorganisms12050959.
L. Wang, J. Wang, D. Guo, and A. Jiang, “Catabolic Activity and Structural Diversity of Bacterial Community in Soil Covered by Halophytic Vegetation,” Current Microbiology 77, no. 8 (2020): 1821–1828, https://doi.org/10.1007/s00284-020-02001-7.
J. Gao and C. L. Wang, “Current Status and Recommendations for Pesticide Registration on Chinese Yam in China,” Primary Agricultural Technology Extension 13, no. 10 (2025): 127–131.
H. Zhou, C. Li, Q. F. Zhou, G. P. Cheng, and X. W. Chen, “Development and Utilization of Yam Resources in the Context of Great Health,” Rural‐Agriculture‐Farmer 2 (2025): 66–68.
S. H. Xu, Comparison of Varietal Characteristics and Exploration of Cultivation Methods of Different Germplasm Resources of Yam. Henan Agricultural University, 2023.
X. B. Sun, Research on the Effect and Mechanism of Action of Continuous Crop Barrier in Yam. Hainan University, 2022.
C. He, W. Wang, and J. Hou, “Plant Growth and Soil Microbial Impacts of Enhancing Licorice With Inoculating Dark Septate Endophytes Under Drought Stress,” Frontiers in Microbiology 10 (2019): 2277.
L. S. Sisti, M. Pena‐Passos, and J. L. S. Mayer, “Isolation, Characterization, and Total DNA Extraction to Identify Endophytic Fungi in Mycoheterotrophic Plants,” JoVE (Journal of Visualized Experiments) 195 (2023): e65135.
S. D. Bao, Soil Agrochemical Analysis. China Agricultural Press, 2000. 3rd ed.
M. Ziegler, V. M. Eguíluz, C. M. Duarte, and C. R. Voolstra, Rare Symbionts May Contribute to the Resilience of Coral‐algal Assemblages. Springer Nature, 2017.
J. H. Yang, C. L. Wang, and H. L. Dai, Soil Agrochemical Analysis and Environmental Monitoring. China Earth Press, 2008.
R. K. Lu, Methods of Soil Agrochemical Analysis. China Agricultural Science and Technology Press, 2000, 271–272.
X. R. Yang, Species Diversity and Drought Tolerance of Dark Septate Endophytes from Different Germplasm of Glycyrrhiza uralensis Fisch. Hebei University, 2023.
W. Sun, C. Luo, Y. Wu, et al., “Paraphoma Chrysanthemicola Affects the Carbohydrate and Lobetyolin Metabolism Regulated by Salicylic Acid in the Soilless Cultivation of Codonopsis pilosula,” Biology (Basel) 13, no. 6 (2024): 408, https://doi.org/10.3390/biology13060408.
P. Bengtson, A. E. Sterngren, and J. Rousk, “Archaeal Abundance Across a pH Gradient in an Arable Soil and Its Relationship to Bacterial and Fungal Growth Rates,” Applied and Environmental Microbiology 78, no. 16 (2012): 5906–5911, https://doi.org/10.1128/AEM.01476-12.
A. S. Aslan, J. Valjakka, J. Ruupunen, et al., “Chaetomium Thermophilum Formate Dehydrogenase Has High Activity in the Reduction of Hydrogen Carbonate (HCO3‐) to Formate,” Protein Engineering, Design & Selection 30, no. 1 (2017): 47–55, https://doi.org/10.1093/protein/gzw062.
L. Li, Study on Microbial Diversity Within and Between Roots of Different Germplasm of Salvia Miltiorrhiza and Its Growth‐promoting Effect. Hebei University, 2024.
C. He, X. Y. Chen, W. Q. Wang, and J. L. Hou, “Species Diversity and Spatial Distribution of Dark‐Colored Septate Endophytic Fungi of Licorice in the Northwestern Dry Zone,” Journal of Mycology 39, no. 8 (2020): 1487–1501.
Z. Zhao, S. Shao, N. Liu, Q. Liu, H. Jacquemyn, and X. Xing, “Extracellular Enzyme Activities and Carbon/Nitrogen Utilization in Mycorrhizal Fungi Isolated from Epiphytic and Terrestrial Orchids,” Frontiers in Microbiology 12 (2021): 787–820, https://doi.org/10.3389/fmicb.2021.787820.
Y. T. Zhang, Y. K. Deng, Y. F. Zou, et al., “Linking Microbial Functional Gene Abundance and Daqu Extracellular Enzyme Activity: Implications for Carbon Metabolism During Fermentation,” Foods 11, no. 22 (2022): 3623, https://doi.org/10.3390/foods11223623.
Z. J. Li, J. R. Hu, H. C. Wang, et al., “Effects of S‐Metolachlor on Microbial Community Structure and Carbon Source Metabolism in Flue‐Cured Tobacco Soil,” Chinese Journal of Pesticide Science 27, no. 2 (2025): 341–350, https://doi.org/10.16801/j.issn.1008-7303.2025.0021.
C. He, C. Liu, H. Liu, W. Wang, J. Hou, and X. Li, “Dual Inoculation of Dark Septate Endophytes and Trichoderma Viride Drives Plant Performance and Rhizosphere Microbiome Adaptations of Astragalus mongholicus to Drought,” Environmental Microbiology 24, no. 1 (2022): 324–340, https://doi.org/10.1111/1462-2920.15878.
D. Su, R. Sun, R. F. Xu, W. H. Zhang, and G. Z. Lyu, “Species Diversity of Dark Septate Endophytes in Tundra Plants of Chang Bai Mountains, Northeast China,” Ying Yong Sheng Tai Xue Bao 35, no. 6 (2024): 1689–1694, https://doi.org/10.13287/j.1001-9332.202406.029.
X. J. Yan, Study on the Diversity of DSE Fungi and Changes in Soil Microbial Community of Small White‐mouthed Yam with Different Foliar Fertilizers. Hebei University, 2023.
A. R. I. Jumpponen and J. M. Trappe, “Dark Septate Endophytes: A Review of Facultative Biotrophic Root‐Colonizing Fungi,” New Phytologist 140, no. 2 (1998): 295–310.
K. C. Goldfarb, U. Karaoz, C. A. Hanson, et al., “Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance,” Frontiers in Microbiology 2 (2011): 94.
J. Zhou, M. Gube, M. Holz, et al., “Ectomycorrhizal and Non‐Mycorrhizal Rhizosphere Fungi Increase Root‐Derived C Input to Soil and Modify Enzyme Activities: A14C Pulse Labelling of Picea Abies Seedlings,” Plant, Cell and Environment 45, no. 10 (2022): 3122–3133, https://doi.org/10.1111/pce.14413.
Y. Li, Y. Ge, J. Wang, C. Shen, J. Wang, and Y. J. Liu, “Functional Redundancy and Specific Taxa Modulate the Contribution of Prokaryotic Diversity and Composition to Multifunctionality,” Molecular Ecology 30, no. 12 (2021): 2915–2930, https://doi.org/10.1111/mec.15935.
Y. Y. Wang, Z. Wei, Y. C. Xu, et al., “Effects of Phosphate‐Solubilizing Bacterial Consortia on Phosphate Solubilization and Growth of Maize,” Journal of Plant Nutrition and Fertilizers 23, no. 1 (2017): 262–268.
W. Dong, Q. Yang, T. S. George, et al., “Investigating Bacterial Coupled Assimilation of Fertilizer‐Nitrogen and Crop Residue‐Carbon in Upland Soils by DNA‐qSIP,” Science of the Total Environment 845 (2022): 157–279, https://doi.org/10.1016/j.scitotenv.2022.157279.
M. Li, J. Hu, Z. Wei, et al., “Synthetic Microbial Communities: Sandbox and Blueprint for Soil Health Enhancement,” Imeta 3, no. 1 (2024): e172, https://doi.org/10.1002/imt2.172.
X. Li, E. E. Lewis, Q. Liu, H. Li, C. Bai, and Y. Wang, “Effects of Long‐Term Continuous Cropping on Soil Nematode Community and Soil Condition Associated with Replant Problem in Strawberry Habitat,” Scientific Reports 6, no. 1 (2016): 30466, https://doi.org/10.1038/srep30466.
S. Pontigo, M. Ulloa, K. Godoy, et al., “Phosphorus Efficiency Modulates Phenol Metabolism in Wheat Genotypes,” Journal of Soil Science and Plant Nutrition 18, no. 3 (2018): 904–920, https://doi.org/10.4067/s0718-95162018005002603.
B. Wang, Y. Lin, W. Yu, et al., “The Loss of Microbial Autotoxin Degradation Functions Is Associated with the Decline of Beneficial Bacterial Agents Induced by Phenolic Acids,” Microbiology Spectrum 11, no. 5 (2023): e03380‐22, https://doi.org/10.1128/spectrum.03380-22.
M. J. Zwetsloot, J. M. Ucros, K. Wickings, et al., “Prevalent Root‐Derived Phenolics Drive Shifts in Microbial Community Composition and Prime Decomposition in Forest Soil,” Soil Biology and Biochemistry 145 (2020): 107797, https://doi.org/10.1016/j.soilbio.2020.107797.
J. Bárta, M. Applová, D. Vaněk, M. Krištůfková, and H. Šantrůčková, “Effect of Available P and Phenolics on Mineral N Release in Acidified Spruce Forest: Connection with Lignin‐Degrading Enzymes and Bacterial and Fungal Communities,” Biogeochemistry 97, no. 1 (2010): 71–87, https://doi.org/10.1007/s10533-009-9363-3.
A. M. Maddox Abiotic Factors and Biotic Interactions Associated With Disease Development in Cotton Seedlings Caused by Rhizoctonia solani and Fusarium oxysporum f. sp. vasinfectum Race 4. Master's Thesis, California State University, Fresno. 2023.
D. Chen, X. Wang, V. J. Carrion, et al., “Acidic Amelioration of Soil Amendments Improves Soil Health by Impacting Rhizosphere Microbial Assemblies,” Soil Biology and Biochemistry 167 (2020): 108599, https://doi.org/10.1016/j.soilbio.2022.108599.
G. Lazarovits, K. L. Conn, P. A. Abbasi, and M. Tenuta, “Understanding the Mode of Action of Organic Soil Amendments Provides the Way for Improved Management of Soilborne Plant Pathogens,” ACta Horticulturae 698 (2005): 215.
S. Ahmad, M. Wang, H. Zhang, et al., “Synergistic Application of Biochar and Lime Modulates Rhizosphere Microbiome, Suppresses Pathogens, and Enhances Disease Resistance in Sugarcane,” BMC Microbiology 25, no. 1 (2025): 622, https://doi.org/10.1186/s12866-025-04355-z.
M. Zou, F. Guo, X. Li, J. Zhao, and Y. Qu, “Enhancing Production of Alkaline Polygalacturonate Lyase from Bacillus subtilis by Fed‐Batch Fermentation,” PLoS One 9, no. 3 (2014): e90392, https://doi.org/10.1371/journal.pone.0090392.
S. Xiao, J. Gao, Q. Wang, Z. Huang, and G. Zhuang, “SOC Bioavailability Significantly Correlated with the Microbial Activity Mediated by Size Fractionation and Soil Morphology in Agricultural Ecosystems,” Environment International 186 (2024): 108–588, https://doi.org/10.1016/j.envint.2024.108588.
M. S. Dodd, Z. Zhang, C. Li, et al., “Development of Carbonate‐Associated Phosphate (CAP) as a Proxy for Reconstructing Ancient Ocean Phosphate Levels,” Geochimica et Cosmochimica Acta 301 (2021): 48–69, https://doi.org/10.1016/j.gca.2021.02.038.
D. S. Maat, K. J. Crawfurd, K. R. Timmermans, and C. P. Brussaard, “Elevated CO2 and Phosphate Limitation Favor Micromonas Pusilla Through Stimulated Growth and Reduced Viral Impact,” Applied and Environmental Microbiology 80, no. 10 (2014): 3119–3127, https://doi.org/10.1128/AEM.03639-13.
X. Sankuan, Z. Cuimei, F. Bingqian, et al., “Metabolic Network of Ammonium in Cereal Vinegar Solid‐State Fermentation and Its Response to Acid Stress,” Food Microbiology 95 (2021): 103–684, https://doi.org/10.1016/j.fm.2020.103684.
Grant Information: C2024201069 Natural Science Foundation of Hebei Province; QN2025140 Natural Science Foundation of Hebei Provincial Universities; XZJJ202315 President's Youth Fund of Hebei University; 2025083 Research Project Plan for Traditional Chinese Medicine Research in Hebei Province; 2211N010 Baoding Science and Technology Innovation Capacity Improvement Special Project; CXZZSS2025011 High-level Talent Startup Program of Hebei University and Postgraduate's Innovation Fund Project of Hebei Province; CXZZSS2026012 High-level Talent Startup Program of Hebei University and Postgraduate's Innovation Fund Project of Hebei Province
Contributed Indexing: Keywords: Chinese yam; DSE fungi; carbon source metabolism; continuous cropping obstacles; rhizosphere microecology
Substance Nomenclature: 7440-44-0 (Carbon)
0 (Soil)
0 (Carboxylic Acids)
I3P9R8317T (phenolic acid)
0 (Hydroxybenzoates)
Entry Date(s): Date Created: 20260806 Date Completed: 20260806 Latest Revision: 20260819
Update Code: 20260819
PubMed Central ID: PMC13444211
DOI: 10.1002/jobm.70191
PMID: 42557934
Βάση Δεδομένων: MEDLINE
FullText Text:
  Availability: 0
CustomLinks:
  – Url: https://resolver.ebsco.com/c/fiv2js/result?sid=EBSCO:cmedm&genre=article&issn=15214028&ISBN=&volume=66&issue=8&date=20260801&spage=e70191&pages=e70191&title=Journal of basic microbiology&atitle=Strain-Specific%20DSE%20Effects%20on%20Yam%20Rhizosphere%20Carbon%20Metabolism%20Are%20Modulated%20by%20Soil%20Factors.&aulast=Guo%20J&id=DOI:10.1002/jobm.70191
    Name: Full Text Finder (for New FTF UI) (ns324271)
    Category: fullText
    Text: Full Text Finder
    MouseOverText: Full Text Finder
Header DbId: cmedm
DbLabel: MEDLINE
An: 42557934
AccessLevel: 3
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Strain-Specific DSE Effects on Yam Rhizosphere Carbon Metabolism Are Modulated by Soil Factors.
– Name: Author
  Label: Authors
  Group: Au
  Data: &lt;searchLink fieldCode=&quot;AU&quot; term=&quot;%22Guo+J%22&quot;&gt;Guo J&lt;/searchLink&gt;; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China.&lt;br /&gt;&lt;searchLink fieldCode=&quot;AU&quot; term=&quot;%22Su+Z%22&quot;&gt;Su Z&lt;/searchLink&gt;; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China.&lt;br /&gt;&lt;searchLink fieldCode=&quot;AU&quot; term=&quot;%22Zhou+M%22&quot;&gt;Zhou M&lt;/searchLink&gt;; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China.&lt;br /&gt;&lt;searchLink fieldCode=&quot;AU&quot; term=&quot;%22Zuo+Y%22&quot;&gt;Zuo Y&lt;/searchLink&gt;; College of Traditional Chinese Medicine, Hebei University, Baoding, Hebei, China.&lt;br /&gt;&lt;searchLink fieldCode=&quot;AU&quot; term=&quot;%22Wang+Y%22&quot;&gt;Wang Y&lt;/searchLink&gt;; School of Basic Medical Sciences, Hebei University, Baoding, Hebei, China.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: &lt;searchLink fieldCode=&quot;JN&quot; term=&quot;%228503885%22&quot;&gt;Journal of basic microbiology&lt;/searchLink&gt; [J Basic Microbiol] 2026 Aug; Vol. 66 (8), pp. e70191.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article
– Name: Language
  Label: Language
  Group: Lang
  Data: English
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: &lt;i&gt;Publisher: &lt;/i&gt;&lt;searchLink fieldCode=&quot;PB&quot; term=&quot;%22Wiley-VCH+Verlag%22&quot;&gt;Wiley-VCH Verlag &lt;/searchLink&gt;&lt;i&gt;Country of Publication: &lt;/i&gt;Germany &lt;i&gt;NLM ID: &lt;/i&gt;8503885 &lt;i&gt;Publication Model: &lt;/i&gt;Print &lt;i&gt;Cited Medium: &lt;/i&gt;Internet &lt;i&gt;ISSN: &lt;/i&gt;1521-4028 (Electronic) &lt;i&gt;Linking ISSN: &lt;/i&gt;&lt;searchLink fieldCode=&quot;IS&quot; term=&quot;%220233111X%22&quot;&gt;0233111X &lt;/searchLink&gt;&lt;i&gt;NLM ISO Abbreviation: &lt;/i&gt;J Basic Microbiol &lt;i&gt;Subsets: &lt;/i&gt;MEDLINE
– Name: PublisherInfo
  Label: Imprint Name(s)
  Group: PubInfo
  Data: &lt;i&gt;Publication&lt;/i&gt;: &lt;2005-&gt;: Weinheim, Germany : Wiley-VCH Verlag&lt;br /&gt;&lt;i&gt;Original Publication&lt;/i&gt;: Berlin : Akademie-Verlag, [1985-
– Name: SubjectMESH
  Label: MeSH Terms
  Group: Su
  Data: &lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Carbon%22&quot;&gt;Carbon*&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Carbon+metabolism%22&quot;&gt;metabolism&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Soil%22&quot;&gt;Soil*&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Soil+chemistry%22&quot;&gt;chemistry&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea%22&quot;&gt;Dioscorea*&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea+microbiology%22&quot;&gt;microbiology&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea%22&quot;&gt;Dioscorea*&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea+metabolism%22&quot;&gt;metabolism&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea%22&quot;&gt;Dioscorea*&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Dioscorea+growth+%26+development%22&quot;&gt;growth &amp; development&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Rhizosphere%22&quot;&gt;Rhizosphere*&lt;/searchLink&gt; &lt;br /&gt;&lt;searchLink fieldCode=&quot;MM&quot; term=&quot;%22Soil+Microbiology%22&quot;&gt;Soil Microbiology*&lt;/searchLink&gt;&lt;br /&gt;&lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Plant+Roots%22&quot;&gt;Plant Roots&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Plant+Roots+microbiology%22&quot;&gt;microbiology&lt;/searchLink&gt; ; &lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Carboxylic+Acids%22&quot;&gt;Carboxylic Acids&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Carboxylic+Acids+metabolism%22&quot;&gt;metabolism&lt;/searchLink&gt; ; &lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Fungi%22&quot;&gt;Fungi&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Fungi+metabolism%22&quot;&gt;metabolism&lt;/searchLink&gt; ; &lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Fungi%22&quot;&gt;Fungi&lt;/searchLink&gt;/&lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Fungi+classification%22&quot;&gt;classification&lt;/searchLink&gt; ; &lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Carbohydrate+Metabolism%22&quot;&gt;Carbohydrate Metabolism&lt;/searchLink&gt; ; &lt;searchLink fieldCode=&quot;MH&quot; term=&quot;%22Hydroxybenzoates%22&quot;&gt;Hydroxybenzoates&lt;/searchLink&gt;
– Name: Abstract
  Label: Abstract
  Group: Ab
  Data: Rhizosphere microbes are vital for plant growth. Dark septate endophytes (DSE) can enhance host plant adaptability and regulate microbial communities, showing promise for yam soil remediation. This study examined how single and mixed inoculations of eight DSE strains affect yam rhizosphere carbon metabolism. Results showed that rhizosphere microbes preferred carbohydrate and amino acid carbon sources. Single inoculations exhibited relatively high overall metabolic activity, whereas mixed inoculations demonstrated distinct advantages in the utilization of specific carbon sources, such as carbohydrates. Key discriminators were phenolic acid, carboxylic acid, and carbohydrate utilization. Different strains enhanced specific pathways: Pe and Fu improved amine metabolism; Ac and Zo excelled in carbohydrate use; Pl boosted polymer metabolism. Changes in carbon metabolism correlated with soil properties: polymer and amine use with pH and SOC; carbohydrate use with AP; phenolic and carboxylic acid use with AN. Soil properties were also altered strain-specifically. The Pe strain emerged as the prime candidate for mitigating yam continuous cropping obstacles by synergistically improving both carbon metabolism and soil quality. These findings aid in developing biofertilizers and rhizosphere remediation strategies.&lt;br /&gt; (&#169; 2026 Wiley‐VCH GmbH.)
– Name: Ref
  Label: References
  Group: RefInfo
  Data: H. P. Bais, T. L. Weir, L. G. Perry, S. Gilroy, and J. M. Vivanco, “The Role of Root Exudates in Rhizosphere Interactions with Plants and Other Organisms,” Annual Review of Plant Biology 57, no. 1 (2006): 233–266, https://doi.org/10.1146/annurev.arplant.57.032905.105159.&lt;br /&gt;K. P. Pal and R. Dey, “Interlinking Soil Microbial Diversity and Rhizodeposition for Enhancing Nutrient Uptake and Productivity,” Indian Journal of Plant Genetic Resources 35 (2022): 360–364, https://doi.org/10.5958/0976-1926.2022.00100.0.&lt;br /&gt;M. Keiluweit, J. J. Bougoure, P. S. Nico, J. Pett‐Ridge, P. K. Weber, and M. Kleber, “Mineral Protection of Soil Carbon Counteracted by Root Exudates,” Nature Climate Change 5, no. 6 (2015): 588–595, https://doi.org/10.1038/nclimate2580.&lt;br /&gt;L. Sun, M. Ataka, M. Han, et al., “Root Exudation as a Major Competitive Fine‐Root Functional Trait of 18 Coexisting Species in a Subtropical Forest,” New Phytologist 229, no. 1 (2021): 259–271, https://doi.org/10.1111/nph.16865.&lt;br /&gt;Y. D. Chen, J. F. Du, Y. Li, H. Tang, Z. Yin, L. Yang, et al., “Evolutions and Managements of Soil Microbial Community Structure Drove by Continuous Cropping,” Frontiers in Microbiology 13 (2022): 839494, https://doi.org/10.3389/fmicb.2022.839494.&lt;br /&gt;H. Tang, J. W. Wang, Z. Q. Zeng, et al., “Effects of Continuous Cropping of Flue‐Cured Tobacco on Rhizosphere and Non‐Rhizosphere Soil Nutrients and Their Eco‐Stoichiometric Characteristics,” Journal of Arid Land Resources and Environment 38, no. 10 (2024): 154–165, https://doi.org/10.13448/j.cnki.jalre.2024.214.&lt;br /&gt;H. M. Wu and W. X. Lin, “Acommentary and Development Perspective on the Consecutive Monoculture Problems of Medicinal Plants,” Chinese Journal of Eco‐Agriculture 28, no. 6 (2020): 775–793, https://doi.org/10.19540/j.cnki.cjcmm.20170103.&lt;br /&gt;S. J. Zhu, L. L. Wang, S. Q. Jin, et al., “Alleviating Effect of Microbial Agents and Bacterial Fertilizers on Continuous Cropping Obstacles in Watermelon,” Chinese Agricultural Science Bulletin 39, no. 28 (2023): 48–53.&lt;br /&gt;X. L. Li, W. X. Zhou, X. G. Jiang, et al., “Control Effects of Microbial Fertilizer on Continuous Cropping Obstacles and Violet Root Rot of Codonopsis Tangshen,” Journal of Agricultural Science and Technology 25, no. 3 (2023): 119–131, https://doi.org/10.1128/spectrum.01088-25.&lt;br /&gt;A. Jumpponen and J. M. Trappe, “Dark Septate Endophytes: A Review of Facultative Biotrophic Root‐Colonizing Fungi,” New Phytologist 140, no. 2 (1998): 295–310, https://doi.org/10.1046/j.1469-8137.1998.00265.x.&lt;br /&gt;S. Daghino, E. Martino, S. Voyron, and S. Perotto, “Metabarcoding of Fungal Assemblages in Vaccinium Myrtillus Endosphere Suggests Colonization of Above‐Ground Organs by Some Ericoid Mycorrhizal and DSE Fungi,” Scientific Reports 12, no. 1 (2022): 11013, https://doi.org/10.1038/s41598-022-15154-1.&lt;br /&gt;Y. Bai, D. B. Muller, G. Srinivas, et al., “Functional Overlap of the Arabidopsis Leaf and Root Microbiota,” Nature 528 (2015): 364–369, https://doi.org/10.1038/nature16192.&lt;br /&gt;S. Li, X. J. Shang, Q. X. Luo, Q. Yan, and R. Hou, “Effects of the Dual Inoculation of Dark Septate Endophytes and Trichoderma Koningiopsis on Blueberry Growth and Rhizosphere Soil Microorganisms,” FEMS Microbiology Ecology 99, no. 2 (2023): fiad008, https://doi.org/10.1093/femsec/fiad008.&lt;br /&gt;N. Akhtar, A. K. Wani, D. S. Dhanjal, and S. Mukherjee, “Insights Into the Beneficial Roles of Dark Septate Endophytes in Plants Under Challenging Environment: Resilience to Biotic and Abiotic Stresses,” World Journal of Microbiology and Biotechnology 38, no. 5 (2022): 79, https://doi.org/10.1007/s11274-022-03264-x.&lt;br /&gt;C. He, W. Wang, and J. Hou, “Plant Growth and Soil Microbial Impacts of Enhancing Licorice with Inoculating Dark Septate Endophytes Under Drought Stress,” Frontiers in Microbiology 10 (2019): 2277, https://doi.org/10.3389/fmicb.2019.02277.&lt;br /&gt;H. Chu, H. Wang, Y. Zhang, et al., “Inoculation with Ectomycorrhizal Fungi and Dark Septate Endophytes Contributes to the Resistance of Pinus spp. to Pine Wilt Disease,” Frontiers in Microbiology 12 (2021): 687304, https://doi.org/10.3389/fmicb.2021.687304.&lt;br /&gt;Q. Pang, D. Qu, W. Li, et al., “Muti‐Omics Insights the Enhancement of Drought Tolerance in Sweet Cherry with Dark Septate Endophyte S16,” Plant Physiology and Biochemistry 222 (2025): 109716, https://doi.org/10.1016/j.plaphy.2025.109716.&lt;br /&gt;Q. Luo, R. Hou, X. Shang, and S. Li, “Effects of Phosphorus‐Dissolving Dark Septate Endophytes on the Growth of Blueberry,” Journal of Microbiology 61, no. 9 (2023): 837–851, https://doi.org/10.1007/s12275-023-00080-2.&lt;br /&gt;N. Fierer, “Embracing the Unknown: Disentangling the Complexities of the Soil Microbiome,” Nature Reviews Microbiology 15 (2017): 579–590, https://doi.org/10.1038/nrmicro.2017.87.&lt;br /&gt;N. Fierer, J. W. Leff, B. J. Adams, et al., “Cross‐Biome Metagenomic Analyses of Soil Microbial Communities and Their Functional Attributes,” Proceedings of the National Academy of Sciences of the United States of America 109 (2012): 21390–21395, https://doi.org/10.1073/pnas.1215210110.&lt;br /&gt;Y. N. Tian and H. Q. Wang, “Application of Biolog Method in the Study of Functional Diversity of Environmental Microorganisms,” Environmental Science and Technology 34, no. 3 (2011): 50–57.&lt;br /&gt;J. L. Garland and A. L. Mills, “Classification and Characterization of Heterotrophic Microbial Communities on the Basis of Patterns of Community‐Level Sole‐Carbon‐Source Utilization,” Applied and Environmental Microbiology 57, no. 8 (1991): 2351–2359, https://doi.org/10.1128/aem.57.8.2351-2359.1991.&lt;br /&gt;Z. Ge, H. Du, Y. Gao, and W. Qiu, “Analysis on Metabolic Functions of Stored Rice Microbial Communities by BIOLOG ECO Microplates,” Frontiers in Microbiology 9 (2018): 1375, https://doi.org/10.3389/fmicb.2018.01375.&lt;br /&gt;X. Wang, X. Cao, H. Liu, et al., “Effects of Lactic Acid Bacteria on Microbial Metabolic Functions of Paper Mulberry Silage: A Biolog‐ECO Microplates Approach,” Frontiers in Microbiology 12 (2021): 689174, https://doi.org/10.3389/fmicb.2021.689174.&lt;br /&gt;Z. Huang, Y. Qin, X. He, et al., “Analysis on Metabolic Functions of Rhizosphere Microbial Communities of Pinus massoniana Provenances with Different Carbon Storage by Biolog‐ECO Microplates,” Frontiers in Microbiology 15 (2024): 1365111, https://doi.org/10.3389/fmicb.2024.1365111.&lt;br /&gt;Z. Huang, X. He, C. Zhang, et al., “Microbial Communities and Functions Changed in Rhizosphere Soil of Pinus massoniana Provenances with Different Carbon Storage,” Frontiers in Microbiology 14 (2023): 1264670, https://doi.org/10.3389/fmicb.2023.1264670.&lt;br /&gt;T. Zhou, S. Wu, M. Gao, and L. Yang, “The Heterogeneous Habitat of Taiga Forests Changes the Soil Microbial Functional Diversity,” Microorganisms 12, no. 5 (2024): 959, https://doi.org/10.3390/microorganisms12050959.&lt;br /&gt;L. Wang, J. Wang, D. Guo, and A. Jiang, “Catabolic Activity and Structural Diversity of Bacterial Community in Soil Covered by Halophytic Vegetation,” Current Microbiology 77, no. 8 (2020): 1821–1828, https://doi.org/10.1007/s00284-020-02001-7.&lt;br /&gt;J. Gao and C. L. Wang, “Current Status and Recommendations for Pesticide Registration on Chinese Yam in China,” Primary Agricultural Technology Extension 13, no. 10 (2025): 127–131.&lt;br /&gt;H. Zhou, C. Li, Q. F. Zhou, G. P. Cheng, and X. W. Chen, “Development and Utilization of Yam Resources in the Context of Great Health,” Rural‐Agriculture‐Farmer 2 (2025): 66–68.&lt;br /&gt;S. H. Xu, Comparison of Varietal Characteristics and Exploration of Cultivation Methods of Different Germplasm Resources of Yam. Henan Agricultural University, 2023.&lt;br /&gt;X. B. Sun, Research on the Effect and Mechanism of Action of Continuous Crop Barrier in Yam. Hainan University, 2022.&lt;br /&gt;C. He, W. Wang, and J. Hou, “Plant Growth and Soil Microbial Impacts of Enhancing Licorice With Inoculating Dark Septate Endophytes Under Drought Stress,” Frontiers in Microbiology 10 (2019): 2277.&lt;br /&gt;L. S. Sisti, M. Pena‐Passos, and J. L. S. Mayer, “Isolation, Characterization, and Total DNA Extraction to Identify Endophytic Fungi in Mycoheterotrophic Plants,” JoVE (Journal of Visualized Experiments) 195 (2023): e65135.&lt;br /&gt;S. D. Bao, Soil Agrochemical Analysis. China Agricultural Press, 2000. 3rd ed.&lt;br /&gt;M. Ziegler, V. M. Egu&#237;luz, C. M. Duarte, and C. R. Voolstra, Rare Symbionts May Contribute to the Resilience of Coral‐algal Assemblages. Springer Nature, 2017.&lt;br /&gt;J. H. Yang, C. L. Wang, and H. L. Dai, Soil Agrochemical Analysis and Environmental Monitoring. China Earth Press, 2008.&lt;br /&gt;R. K. Lu, Methods of Soil Agrochemical Analysis. China Agricultural Science and Technology Press, 2000, 271–272.&lt;br /&gt;X. R. Yang, Species Diversity and Drought Tolerance of Dark Septate Endophytes from Different Germplasm of Glycyrrhiza uralensis Fisch. Hebei University, 2023.&lt;br /&gt;W. Sun, C. Luo, Y. Wu, et al., “Paraphoma Chrysanthemicola Affects the Carbohydrate and Lobetyolin Metabolism Regulated by Salicylic Acid in the Soilless Cultivation of Codonopsis pilosula,” Biology (Basel) 13, no. 6 (2024): 408, https://doi.org/10.3390/biology13060408.&lt;br /&gt;P. Bengtson, A. E. Sterngren, and J. Rousk, “Archaeal Abundance Across a pH Gradient in an Arable Soil and Its Relationship to Bacterial and Fungal Growth Rates,” Applied and Environmental Microbiology 78, no. 16 (2012): 5906–5911, https://doi.org/10.1128/AEM.01476-12.&lt;br /&gt;A. S. Aslan, J. Valjakka, J. Ruupunen, et al., “Chaetomium Thermophilum Formate Dehydrogenase Has High Activity in the Reduction of Hydrogen Carbonate (HCO3‐) to Formate,” Protein Engineering, Design &amp; Selection 30, no. 1 (2017): 47–55, https://doi.org/10.1093/protein/gzw062.&lt;br /&gt;L. Li, Study on Microbial Diversity Within and Between Roots of Different Germplasm of Salvia Miltiorrhiza and Its Growth‐promoting Effect. Hebei University, 2024.&lt;br /&gt;C. He, X. Y. Chen, W. Q. Wang, and J. L. Hou, “Species Diversity and Spatial Distribution of Dark‐Colored Septate Endophytic Fungi of Licorice in the Northwestern Dry Zone,” Journal of Mycology 39, no. 8 (2020): 1487–1501.&lt;br /&gt;Z. Zhao, S. Shao, N. Liu, Q. Liu, H. Jacquemyn, and X. Xing, “Extracellular Enzyme Activities and Carbon/Nitrogen Utilization in Mycorrhizal Fungi Isolated from Epiphytic and Terrestrial Orchids,” Frontiers in Microbiology 12 (2021): 787–820, https://doi.org/10.3389/fmicb.2021.787820.&lt;br /&gt;Y. T. Zhang, Y. K. Deng, Y. F. Zou, et al., “Linking Microbial Functional Gene Abundance and Daqu Extracellular Enzyme Activity: Implications for Carbon Metabolism During Fermentation,” Foods 11, no. 22 (2022): 3623, https://doi.org/10.3390/foods11223623.&lt;br /&gt;Z. J. Li, J. R. Hu, H. C. Wang, et al., “Effects of S‐Metolachlor on Microbial Community Structure and Carbon Source Metabolism in Flue‐Cured Tobacco Soil,” Chinese Journal of Pesticide Science 27, no. 2 (2025): 341–350, https://doi.org/10.16801/j.issn.1008-7303.2025.0021.&lt;br /&gt;C. He, C. Liu, H. Liu, W. Wang, J. Hou, and X. Li, “Dual Inoculation of Dark Septate Endophytes and Trichoderma Viride Drives Plant Performance and Rhizosphere Microbiome Adaptations of Astragalus mongholicus to Drought,” Environmental Microbiology 24, no. 1 (2022): 324–340, https://doi.org/10.1111/1462-2920.15878.&lt;br /&gt;D. Su, R. Sun, R. F. Xu, W. H. Zhang, and G. Z. Lyu, “Species Diversity of Dark Septate Endophytes in Tundra Plants of Chang Bai Mountains, Northeast China,” Ying Yong Sheng Tai Xue Bao 35, no. 6 (2024): 1689–1694, https://doi.org/10.13287/j.1001-9332.202406.029.&lt;br /&gt;X. J. Yan, Study on the Diversity of DSE Fungi and Changes in Soil Microbial Community of Small White‐mouthed Yam with Different Foliar Fertilizers. Hebei University, 2023.&lt;br /&gt;A. R. I. Jumpponen and J. M. Trappe, “Dark Septate Endophytes: A Review of Facultative Biotrophic Root‐Colonizing Fungi,” New Phytologist 140, no. 2 (1998): 295–310.&lt;br /&gt;K. C. Goldfarb, U. Karaoz, C. A. Hanson, et al., “Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance,” Frontiers in Microbiology 2 (2011): 94.&lt;br /&gt;J. Zhou, M. Gube, M. Holz, et al., “Ectomycorrhizal and Non‐Mycorrhizal Rhizosphere Fungi Increase Root‐Derived C Input to Soil and Modify Enzyme Activities: A14C Pulse Labelling of Picea Abies Seedlings,” Plant, Cell and Environment 45, no. 10 (2022): 3122–3133, https://doi.org/10.1111/pce.14413.&lt;br /&gt;Y. Li, Y. Ge, J. Wang, C. Shen, J. Wang, and Y. J. Liu, “Functional Redundancy and Specific Taxa Modulate the Contribution of Prokaryotic Diversity and Composition to Multifunctionality,” Molecular Ecology 30, no. 12 (2021): 2915–2930, https://doi.org/10.1111/mec.15935.&lt;br /&gt;Y. Y. Wang, Z. Wei, Y. C. Xu, et al., “Effects of Phosphate‐Solubilizing Bacterial Consortia on Phosphate Solubilization and Growth of Maize,” Journal of Plant Nutrition and Fertilizers 23, no. 1 (2017): 262–268.&lt;br /&gt;W. Dong, Q. Yang, T. S. George, et al., “Investigating Bacterial Coupled Assimilation of Fertilizer‐Nitrogen and Crop Residue‐Carbon in Upland Soils by DNA‐qSIP,” Science of the Total Environment 845 (2022): 157–279, https://doi.org/10.1016/j.scitotenv.2022.157279.&lt;br /&gt;M. Li, J. Hu, Z. Wei, et al., “Synthetic Microbial Communities: Sandbox and Blueprint for Soil Health Enhancement,” Imeta 3, no. 1 (2024): e172, https://doi.org/10.1002/imt2.172.&lt;br /&gt;X. Li, E. E. Lewis, Q. Liu, H. Li, C. Bai, and Y. Wang, “Effects of Long‐Term Continuous Cropping on Soil Nematode Community and Soil Condition Associated with Replant Problem in Strawberry Habitat,” Scientific Reports 6, no. 1 (2016): 30466, https://doi.org/10.1038/srep30466.&lt;br /&gt;S. Pontigo, M. Ulloa, K. Godoy, et al., “Phosphorus Efficiency Modulates Phenol Metabolism in Wheat Genotypes,” Journal of Soil Science and Plant Nutrition 18, no. 3 (2018): 904–920, https://doi.org/10.4067/s0718-95162018005002603.&lt;br /&gt;B. Wang, Y. Lin, W. Yu, et al., “The Loss of Microbial Autotoxin Degradation Functions Is Associated with the Decline of Beneficial Bacterial Agents Induced by Phenolic Acids,” Microbiology Spectrum 11, no. 5 (2023): e03380‐22, https://doi.org/10.1128/spectrum.03380-22.&lt;br /&gt;M. J. Zwetsloot, J. M. Ucros, K. Wickings, et al., “Prevalent Root‐Derived Phenolics Drive Shifts in Microbial Community Composition and Prime Decomposition in Forest Soil,” Soil Biology and Biochemistry 145 (2020): 107797, https://doi.org/10.1016/j.soilbio.2020.107797.&lt;br /&gt;J. B&#225;rta, M. Applov&#225;, D. Vaněk, M. Krištůfkov&#225;, and H. Šantrůčkov&#225;, “Effect of Available P and Phenolics on Mineral N Release in Acidified Spruce Forest: Connection with Lignin‐Degrading Enzymes and Bacterial and Fungal Communities,” Biogeochemistry 97, no. 1 (2010): 71–87, https://doi.org/10.1007/s10533-009-9363-3.&lt;br /&gt;A. M. Maddox Abiotic Factors and Biotic Interactions Associated With Disease Development in Cotton Seedlings Caused by Rhizoctonia solani and Fusarium oxysporum f. sp. vasinfectum Race 4. Master&#39;s Thesis, California State University, Fresno. 2023.&lt;br /&gt;D. Chen, X. Wang, V. J. Carrion, et al., “Acidic Amelioration of Soil Amendments Improves Soil Health by Impacting Rhizosphere Microbial Assemblies,” Soil Biology and Biochemistry 167 (2020): 108599, https://doi.org/10.1016/j.soilbio.2022.108599.&lt;br /&gt;G. Lazarovits, K. L. Conn, P. A. Abbasi, and M. Tenuta, “Understanding the Mode of Action of Organic Soil Amendments Provides the Way for Improved Management of Soilborne Plant Pathogens,” ACta Horticulturae 698 (2005): 215.&lt;br /&gt;S. Ahmad, M. Wang, H. Zhang, et al., “Synergistic Application of Biochar and Lime Modulates Rhizosphere Microbiome, Suppresses Pathogens, and Enhances Disease Resistance in Sugarcane,” BMC Microbiology 25, no. 1 (2025): 622, https://doi.org/10.1186/s12866-025-04355-z.&lt;br /&gt;M. Zou, F. Guo, X. Li, J. Zhao, and Y. Qu, “Enhancing Production of Alkaline Polygalacturonate Lyase from Bacillus subtilis by Fed‐Batch Fermentation,” PLoS One 9, no. 3 (2014): e90392, https://doi.org/10.1371/journal.pone.0090392.&lt;br /&gt;S. Xiao, J. Gao, Q. Wang, Z. Huang, and G. Zhuang, “SOC Bioavailability Significantly Correlated with the Microbial Activity Mediated by Size Fractionation and Soil Morphology in Agricultural Ecosystems,” Environment International 186 (2024): 108–588, https://doi.org/10.1016/j.envint.2024.108588.&lt;br /&gt;M. S. Dodd, Z. Zhang, C. Li, et al., “Development of Carbonate‐Associated Phosphate (CAP) as a Proxy for Reconstructing Ancient Ocean Phosphate Levels,” Geochimica et Cosmochimica Acta 301 (2021): 48–69, https://doi.org/10.1016/j.gca.2021.02.038.&lt;br /&gt;D. S. Maat, K. J. Crawfurd, K. R. Timmermans, and C. P. Brussaard, “Elevated CO2 and Phosphate Limitation Favor Micromonas Pusilla Through Stimulated Growth and Reduced Viral Impact,” Applied and Environmental Microbiology 80, no. 10 (2014): 3119–3127, https://doi.org/10.1128/AEM.03639-13.&lt;br /&gt;X. Sankuan, Z. Cuimei, F. Bingqian, et al., “Metabolic Network of Ammonium in Cereal Vinegar Solid‐State Fermentation and Its Response to Acid Stress,” Food Microbiology 95 (2021): 103–684, https://doi.org/10.1016/j.fm.2020.103684.
– Name: GrantInfo
  Label: Grant Information
  Group: Grant
  Data: C2024201069 Natural Science Foundation of Hebei Province; QN2025140 Natural Science Foundation of Hebei Provincial Universities; XZJJ202315 President&#39;s Youth Fund of Hebei University; 2025083 Research Project Plan for Traditional Chinese Medicine Research in Hebei Province; 2211N010 Baoding Science and Technology Innovation Capacity Improvement Special Project; CXZZSS2025011 High-level Talent Startup Program of Hebei University and Postgraduate&#39;s Innovation Fund Project of Hebei Province; CXZZSS2026012 High-level Talent Startup Program of Hebei University and Postgraduate&#39;s Innovation Fund Project of Hebei Province
– Name: SubjectMinor
  Label: Contributed Indexing
  Group:
  Data: &lt;i&gt;Keywords: &lt;/i&gt;Chinese yam; DSE fungi; carbon source metabolism; continuous cropping obstacles; rhizosphere microecology
– Name: NumberCAS
  Label: Substance Nomenclature
  Group: ID
  Data: 7440-44-0 (Carbon)&lt;br /&gt;0 (Soil)&lt;br /&gt;0 (Carboxylic Acids)&lt;br /&gt;I3P9R8317T (phenolic acid)&lt;br /&gt;0 (Hydroxybenzoates)
– Name: DateEntry
  Label: Entry Date(s)
  Group: Date
  Data: &lt;i&gt;Date Created: &lt;/i&gt;20260806 &lt;i&gt;Date Completed: &lt;/i&gt;20260806 &lt;i&gt;Latest Revision: &lt;/i&gt;20260819
– Name: DateUpdate
  Label: Update Code
  Group: Date
  Data: 20260819
– Name: PubmedCentralID
  Label: PubMed Central ID
  Group: ID
  Data: PMC13444211
– Name: DOI
  Label: DOI
  Group: ID
  Data: 10.1002/jobm.70191
– Name: AN
  Label: PMID
  Group: ID
  Data: 42557934
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=cmedm&AN=42557934
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1002/jobm.70191
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: e70191
    Subjects:
      – SubjectFull: Plant Roots microbiology
        Type: general
      – SubjectFull: Carboxylic Acids metabolism
        Type: general
      – SubjectFull: Fungi metabolism
        Type: general
      – SubjectFull: Fungi classification
        Type: general
      – SubjectFull: Carbohydrate Metabolism
        Type: general
      – SubjectFull: Hydroxybenzoates
        Type: general
      – SubjectFull: Carbon metabolism
        Type: general
      – SubjectFull: Soil chemistry
        Type: general
      – SubjectFull: Dioscorea microbiology
        Type: general
      – SubjectFull: Dioscorea metabolism
        Type: general
      – SubjectFull: Dioscorea growth & development
        Type: general
      – SubjectFull: Rhizosphere
        Type: general
      – SubjectFull: Soil Microbiology
        Type: general
    Titles:
      – TitleFull: Strain-Specific DSE Effects on Yam Rhizosphere Carbon Metabolism Are Modulated by Soil Factors.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Guo J
      – PersonEntity:
          Name:
            NameFull: Su Z
      – PersonEntity:
          Name:
            NameFull: Zhou M
      – PersonEntity:
          Name:
            NameFull: Zuo Y
      – PersonEntity:
          Name:
            NameFull: Wang Y
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 01
              M: 08
              Text: 2026 Aug
              Type: published
              Y: 2026
          Identifiers:
            – Type: issn-electronic
              Value: 1521-4028
          Numbering:
            – Type: volume
              Value: 66
            – Type: issue
              Value: 8
          Titles:
            – TitleFull: Journal of basic microbiology
              Type: main
ResultId 1