Recent Advances in Structured Illumination Microscopy: From Fundamental Principles to AI-Enhanced Imaging.

Λεπτομέρειες βιβλιογραφικής εγγραφής
Τίτλος:	Recent Advances in Structured Illumination Microscopy: From Fundamental Principles to AI-Enhanced Imaging.
Συγγραφείς:	Zhang H; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China.; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China., Zhu Y; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China.; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China., Jin L; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China., Yang H; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China.; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China., Wang J; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China.; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China., Ablameyko S; National Academy of Sciences United Institute of Informatics Problems, Belarusian State University, Minsk, 220070, Republic of Belarus., Liu X; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China., Xu Y; Department of Biomedical Engineering, MOE Key Laboratory of Biomedical Engineering, Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, 310027, China.; State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China.; Department of Endocrinology, Children's Hospital of Zhejiang University School of Medicine, National Clinical Research Center for Children's Health, Hangzhou, 310052, China.; Binjiang Institute of Zhejiang University, Hangzhou, 310053, China.
Πηγή:	Small methods [Small Methods] 2025 May; Vol. 9 (5), pp. e2401616. Date of Electronic Publication: 2025 Mar 03.
Τύπος έκδοσης:	Journal Article; Review; Research Support, Non-U.S. Gov't
Γλώσσα:	English
Στοιχεία περιοδικού:	Publisher: WILEY-VCH Verlag GmbH & Co. KGaA Country of Publication: Germany NLM ID: 101724536 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2366-9608 (Electronic) Linking ISSN: 23669608 NLM ISO Abbreviation: Small Methods Subsets: MEDLINE
Imprint Name(s):	Original Publication: Weinheim : WILEY-VCH Verlag GmbH & Co. KGaA, [2017]-
Ιατρικοί όροι (MeSH):	Image Processing, Computer-Assisted/methods , Microscopy/methods , Lighting/methods , Artificial Intelligence, Deep Learning ; Humans ; Algorithms ; Neural Networks, Computer
Περίληψη:	Structured illumination microscopy (SIM) has emerged as a pivotal super-resolution technique in biological imaging. This review aims to introduce the fundamental principles of SIM, primarily focuses on the latest developments in super-resolution SIM imaging, such as the light illumination and modulation devices, and the image reconstruction algorithms. Additionally, the application of deep learning (DL) technology in SIM imaging is explored, which is employed to enhance image quality, accelerate imaging and reconstruction speed or replace the current image reconstruction method. Furthermore, the key evaluation metrics are proposed and discussed for assessment of deep-learning neural networks, especially for their employment in SIM. Finally, the future integration of artificial intelligence (AI) with SIM system and the perspective of smart microscope are also discussed. (© 2025 Wiley‐VCH GmbH.)
References:	R. Heintzmann, M. G. L. Gustafsson, Nat. Photonics 2009, 3, 362. S. J. Sahl, S. W. Hell, S. Jakobs, Nat. Rev. Mol. Cell Biol. 2017, 18, 685. Y. Wu, H. Shroff, Nat. Methods 2018, 15, 1011. L. Schermelleh, A. Ferrand, T. Huser, C. Eggeling, M. Sauer, O. Biehlmaier, G. P. C. Drummen, Nat. Cell Biol. 2019, 21, 72. R. Heintzmann, T. Huser, Chem. Rev. 2017, 117, 13890. M. Sivaguru, M. A. Urban, G. Fried, C. J. Wesseln, L. Mander, S. W. Punyasena, Microsc. Res. Tech. 2018, 81, 101. M. G. L. Gustafsson, Proc. Natl. Acad. Sci. USA 2005, 102, 13081. M. J. Rust, M. Bates, X. Zhuang, Nat. Methods 2006, 3, 793. E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott‐Schwartz, H. F. Hess, Science 2006, 313, 1642. T. A. Klar, S. W. Hell, Opt. Lett. 1999, 24, 954. S. W. Hell, Science 2007, 316, 1153. R. Fiolka, L. Shao, E. H. Rego, M. W. Davidson, M. G. L. Gustafsson, Proc. Natl. Acad. Sci. USA 2012, 109, 5311. D. Li, L. Shao, B.‐C. Chen, X. Zhang, M. Zhang, B. Moses, D. E. Milkie, J. R. Beach, J. A. Hammer, M. Pasham, T. Kirchhausen, M. A. Baird, M. W. Davidson, P. Xu, E. Betzig, Science 2015, 349, aab3500. Y. Ma, K. Wen, M. Liu, J. Zheng, K. Chu, Z. J. Smith, L. Liu, P. Gao, J. Phys. Photonics 2021, 3, 024009. M. G. L. Gustafsson, J. Microsc. 2000, 198, 82. A. Forbes, M. de Oliveira, M. R. Dennis, Nat. Photonics 2021, 15, 253. T. Zhao, Z. Wang, T. Chen, M. Lei, B. Yao, P. R. Bianco, Front. Phys. 2021, 9, 672555. S. J. Sahl, S. W. Hell, in High Resolution Imaging in Microscopy and Ophthalmology: New Frontiers in Biomedical Optics, (Ed: J. F. Bille), Springer International Publishing, Cham 2019, pp. 3. B.‐J. Chang, V. D. Perez Meza, E. H. K. Stelzer, Proc. Natl. Acad. Sci. USA 2017, 114, 4869. F. Wang, Z. Ma, Y. Zhong, F. Salazar, C. Xu, F. Ren, L. Qu, A. M. Wu, H. Dai, Proc. Natl. Acad. Sci. USA 2021, 118, 2023888118. B. Chen, B.‐J. Chang, P. Roudot, F. Zhou, E. Sapoznik, M. Marlar‐Pavey, J. B. Hayes, P. T. Brown, C.‐W. Zeng, T. Lambert, J. R. Friedman, C.‐L. Zhang, D. T. Burnette, D. P. Shepherd, K. M. Dean, R. P. Fiolka, Nat. Methods 2022, 19, 1419. R. Fiolka, Nat. Methods 2022, 19, 1355. Y. Wang, Z. Yu, C. K. Cahoon, T. Parmely, N. Thomas, J. R. Unruh, B. D. Slaughter, R. S. Hawley, Nat. Protoc. 2018, 13, 1869. O. Schulz, C. Pieper, M. Clever, J. Pfaff, A. Ruhlandt, R. H. Kehlenbach, F. S. Wouters, J. Großhans, G. Bunt, J. Enderlein, Proc. Natl. Acad. Sci. USA 2013, 110, 21000. F. Ströhl, C. F. Kaminski, Optica 2016, 3, 667. E. Ward, R. Pal, J. Microsc. 2017, 266, 221. B.‐C. Chen, W. R. Legant, K. Wang, L. Shao, D. E. Milkie, M. W. Davidson, C. Janetopoulos, X. S. Wu, J. A. Hammer, Z. Liu, B. P. English, Y. Mimori‐Kiyosue, D. P. Romero, A. T. Ritter, J. Lippincott‐Schwartz, L. Fritz‐Laylin, R. D. Mullins, D. M. Mitchell, J. N. Bembenek, A.‐C. Reymann, R. Böhme, S. W. Grill, J. T. Wang, G. Seydoux, U. S. Tulu, D. P. Kiehart, E. Betzig, Science 2014, 346, 1257998. C. Zhang, N. Xu, Q. Tan, Biomed. Opt. Express 2022, 13, 6113. H.‐W. Lu‐Walther, M. Kielhorn, R. Förster, A. Jost, K. Wicker, R. Heintzmann, Methods Appl. Fluoresc. 2015, 3, 014001. A. Sandmeyer, M. Lachetta, H. Sandmeyer, W. Hübner, T. Huser, M. Müller, bioarXiv 2019. A. Lal, C. Shan, P. Xi, IEEE J. Sel. Top. Quantum Electron. 2016, 22, 50. C.‐H. Yeh, S.‐Y. Chen, Appl. Opt. 2015, 54, 2309. J. Huff, Nat. Methods 2015, 12, i. C. J. R. Sheppard, Appl. Sci. 2021, 11, 8981. C. Zhang, B. Yu, F. Lin, S. Samanta, H. Yu, W. Zhang, Y. Jing, C. Shang, D. Lin, K. Si, W. Gong, J. Qu, PhotoniX 2023, 4, 38. A. G. York, S. H. Parekh, D. D. Nogare, R. S. Fischer, K. Temprine, M. Mione, A. B. Chitnis, C. A. Combs, H. Shroff, Nat. Methods 2012, 9, 749. H. An, W. Koh, S. Kang, M.‐H. Nam, C. J. Lee, Exp. Neurobiol. 2021, 30, 213. G. M. Gibson, S. D. Johnson, M. J. Padgett, Opt. Express 2020, 28, 28190. H.‐M. Chen, J.‐P. Yang, H.‐T. Yen, Z.‐N. Hsu, Y. Huang, S.‐T. Wu, Appl. Sci. 2018, 8, 2323. M. Pivnenko, K. Li, D. Chu, Opt. Express 2021, 29, 24614. X.‐B. Hu, C. Rosales‐Guzmán, J. Opt. 2022, 24, 034001. E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, A. Sentenac, Nat. Photonics 2012, 6, 312. R. Ayuk, H. Giovannini, A. Jost, E. Mudry, J. Girard, T. Mangeat, N. Sandeau, R. Heintzmann, K. Wicker, K. Belkebir, A. Sentenac, Opt. Lett. 2013, 38, 4723. J. Idier, S. Labouesse, M. Allain, P. Liu, S. Bourguignon, A. Sentenac, IEEE Trans. Comput. Imaging 2018, 4, 87. A. Vigoren, J. M. Zavislan, J. Opt. Soc. Am. A 2018, 35, 474. Y. Novikau, R. Wolleschensky, Introducing Lattice SIM for ZEISS Elyra 7‐Structured Illumination Microscopy with a 3D Lattice for Live Cell Imaging, https://pages.zeiss.com/rs/896‐XMS‐794/images/ZEISS‐Microscopy‐Technology‐Note‐Introducing‐Lattice‐SIM.pdf, (accessed: December, 2018). A. Löschberger, Y. Novikau, R. Netz, M.‐C. Spindler, R. Benavente, T. Klein, M. Sauer, D. I. Kleppe, bioRxiv 12.443720 2021. T. Zhao, Z. Wang, M. Shu, J. Zhang, Y. Liang, S. Wang, M. Lei, arXiv 2402.02775 2024. J. Fan, X. Huang, L. Li, S. Tan, L. Chen, Biophys. Rep. 2019, 5, 80. A. Markwirth, M. Lachetta, V. Mönkemöller, R. Heintzmann, W. Hübner, T. Huser, M. Müller, Nat. Commun. 2019, 10, 4315. J. Qian, Y. Cao, Y. Bi, H. Wu, Y. Liu, Q. Chen, C. Zuo, eLight 2023, 3, 4. S. Tu, Q. Liu, X. Liu, W. Liu, Z. Zhang, T. Luo, C. Kuang, X. Liu, X. Hao, Opt. Lett. 2020, 45, 1567. G. Wen, S. Li, L. Wang, X. Chen, Z. Sun, Y. Liang, X. Jin, Y. Xing, Y. Jiu, Y. Tang, H. Li, Light: Sci. Appl. 2021, 10, 70. Z. Wang, T. Zhao, H. Hao, Y. Cai, K. Feng, X. Yun, Y. Liang, S. Wang, Y. Sun, P. R. Bianco, K. Oh, M. Lei, Adv. Photonics 2022, 4, 026003. Z. Wang, T. Zhao, Y. Cai, J. Zhang, H. Hao, Y. Liang, S. Wang, Y. Sun, T. Chen, P. R. Bianco, K. Oh, M. Lei, Innovation 2023, 4, 100425. Y. Mo, K. Wang, L. Li, S. Xing, S. Ye, J. Wen, X. Duan, Z. Luo, W. Gou, T. Chen, Y.‐H. Zhang, C. Guo, J. Fan, L. Chen, Nat. Commun. 2023, 14, 3089. J. Qian, K. Xu, S. Feng, Y. Liu, H. Ma, Q. Chen, C. Zuo, ACS Photonics 2024, 11, 1887. X. Huang, J. Fan, L. Li, H. Liu, R. Wu, Y. Wu, L. Wei, H. Mao, A. Lal, P. Xi, L. Tang, Y. Zhang, Y. Liu, S. Tan, L. Chen, Nat. Biotechnol. 2018, 36, 451. W. Zhao, S. Zhao, L. Li, X. Huang, S. Xing, Y. Zhang, G. Qiu, Z. Han, Y. Shang, D. Sun, C. Shan, R. Wu, L. Gu, S. Zhang, R. Chen, J. Xiao, Y. Mo, J. Wang, W. Ji, X. Chen, B. Ding, Y. Liu, H. Mao, B.‐L. Song, J. Tan, J. Liu, H. Li, L. Chen, Nat. Biotechnol. 2022, 40, 606. A. Lal, C. Shan, K. Zhao, W. Liu, X. Huang, W. Zong, L. Chen, P. Xi, IEEE Trans. Image Process. 2018, 27, 4555. Y. Zhang, J. Fei, G. Liu, J. Deng, H. Yang, OSA Continuum, OSAC 2020, 3, 1. J. Qian, Y. Cao, K. Xu, Y. Bi, W. Xia, Q. Chen, C. Zuo, Appl. Phys. Lett. 2022, 121, 153701. H. Wu, Y. Li, Y. Sun, L. Yin, W. Sun, Z. Ye, X. Yang, H. Zhu, M. Tang, Y. Han, C. Kuang, X. Liu, APL Photonics 2024, 9, 036102. Y. Guo, D. Li, S. Zhang, Y. Yang, J.‐J. Liu, X. Wang, C. Liu, D. E. Milkie, R. P. Moore, U. S. Tulu, D. P. Kiehart, J. Hu, J. Lippincott‐Schwartz, E. Betzig, D. Li, Cell 2018, 175, 1430. M. Tokunaga, N. Imamoto, K. Sakata‐Sogawa, Nat. Methods 2008, 5, 159. M. Weigert, U. Schmidt, T. Boothe, A. Müller, A. Dibrov, A. Jain, B. Wilhelm, D. Schmidt, C. Broaddus, S. Culley, M. Rocha‐Martins, F. Segovia‐Miranda, C. Norden, R. Henriques, M. Zerial, M. Solimena, J. Rink, P. Tomancak, L. Royer, F. Jug, E. W. Myers, Nat. Methods 2018, 15, 1090. X. Li, Y. Wu, Y. Su, I. Rey‐Suarez, C. Matthaeus, T. B. Updegrove, Z. Wei, L. Zhang, H. Sasaki, Y. Li, M. Guo, J. P. Giannini, H. D. Vishwasrao, J. Chen, S.‐J. J. Lee, L. Shao, H. Liu, K. S. Ramamurthi, J. W. Taraska, A. Upadhyaya, P. La Riviere, H. Shroff, Nat. Biotechnol. 2023, 41, 1307. Z. Ouyang, Q. Wang, X. Li, Q. Dai, M. Tang, L. Shao, W. Gou, Z. Yu, Y. Chen, B. Zheng, L. Chen, C. Ping, X. Bi, B. Xiao, X. Yu, C. Liu, L. Chen, J. Fan, X. Huang, Y. Zhang, Nat. Methods 2024, 22, 335. L. Shao, B. Isaac, S. Uzawa, D. A. Agard, J. W. Sedat, M. G. L. Gustafsson, Biophys. J. 2008, 94, 4971. E. He, Y. Sun, H. Zhu, X. Yang, L. Yin, Y. Han, C. Kuang, X. Liu, arXiv 2025, 629092. C. S. Smith, J. A. Slotman, L. Schermelleh, N. Chakrova, S. Hari, Y. Vos, C. W. Hagen, M. Müller, W. van Cappellen, A. B. Houtsmuller, J. P. Hoogenboom, S. Stallinga, Nat. Methods 2021, 18, 821. A. Bilodeau, C. V. L. Delmas, M. Parent, P. De Koninck, A. Durand, F. Lavoie‐Cardinal, Nat. Mach. Intell. 2022, 4, 455. Z. Liu, L. Jin, J. Chen, Q. Fang, S. Ablameyko, Z. Yin, Y. Xu, Comput. Biol. Med. 2021, 134, 104523. C. Qiao, D. Li, Y. Liu, S. Zhang, K. Liu, C. Liu, Y. Guo, T. Jiang, C. Fang, N. Li, Y. Zeng, K. He, X. Zhu, J. Lippincott‐Schwartz, Q. Dai, D. Li, Nat. Biotechnol. 2022, 41, 367. O. Ronneberger, P. Fischer, T. Brox, in Medical Image Computing and Computer‐Assisted Intervention – MICCAI 2015, (Eds.: N. Navab, J. Hornegger, W.M. Wells, A. F. Frangi), Springer International Publishing, Cham 2015, pp. 234. Y. Zhang, K. Li, K. Li, L. Wang, B. Zhong, Y. Fu, Proceedings of the European Conference on Computer Vision (ECCV), Springer, Berlin 2018, pp. 286–301. F. Luo, J. Zeng, Z. Shao, C. Zhang, Optics Lasers Eng. 2023, 162, 107432. D. Mahecic, W. L. Stepp, C. Zhang, J. Griffié, M. Weigert, S. Manley, Nat. Methods 2022, 19, 1262. Q. Zhang, J. Chen, J. Li, E. Bo, H. Jiang, X. Lu, L. Zhong, J. Tian, Optics Lasers Eng. 2022, 155, 107066. L. Jin, B. Liu, F. Zhao, S. Hahn, B. Dong, R. Song, T. C. Elston, Y. Xu, K. M. Hahn, Nat. Commun. 2020, 11, 1934. Z. H. Shah, M. Müller, T.‐C. Wang, P. M. Scheidig, A. Schneider, M. Schüttpelz, T. Huser, W. Schenck, Photonics Res. 2021, 9, B168. X. Zhu, X. Chang, R. Zhao, Z. Wu, S. Wang, Q. Jiao, L. Bian, in Optoelectronic Imaging and Multimedia Technology, IX, SPIE, Bellingham, WA 2023, pp. 47–53. B. Liu, J. Liao, Y. Song, C. Chen, L. Ding, J. Lu, J. Zhou, F. Wang, Nanoscale Adv. 2021, 4, 30. C. Ling, C. Zhang, M. Wang, F. Meng, L. Du, X. Yuan, Photonics Res. 2020, 8, 1350. H. Wang, Y. Rivenson, Y. Jin, Z. Wei, R. Gao, H. Günaydın, L. A. Bentolila, C. Kural, A. Ozcan, Nat. Methods 2019, 16, 103. C. Qiao, X. Chen, S. Zhang, D. Li, Y. Guo, Q. Dai, D. Li, IEEE J. Sel. Top. Quantum Electron. 2021, 27, 1. P. Wijesinghe, S. Corsetti, D. J. X. Chow, S. Sakata, K. R. Dunning, K. Dholakia, Light: Sci. Appl. 2022, 11, 319. X. Chen, B. Li, S. Jiang, T. Zhang, X. Zhang, P. Qin, X. Yuan, Y. Zhang, G. Zheng, X. Ji, IEEE Trans. Comput. Imag. 2021, 7, 700. Y. He, Y. Yao, Y. He, Z. Huang, F. Luo, C. Zhang, D. Qi, T. Jia, Z. Wang, Z. Sun, X. Yuan, S. Zhang, Biomed. Opt. Express 2023, 14, 106. X. Liu, J. Li, X. Fang, J. Li, J. Zheng, J. Li, N. Ali, C. Zuo, P. Gao, S. An, Opt. Commun. 2023, 537, 129431. Z. Burns, Z. Liu, Opt. Express 2023, 31, 8714. S. Dong, J. Liao, K. Guo, L. Bian, J. Suo, G. Zheng, Biomed. Opt. Express 2015, 6, 2946. F. Orieux, E. Sepulveda, V. Loriette, B. Dubertret, J.‐C. Olivo‐Marin, IEEE Trans. Image Process. 2012, 21, 601. J.‐Y. Zhu, T. Park, P. Isola, A. A. Efros, presented at 2017 IEEE International Conference on Computer Vision (ICCV), Venice, Italy, (accessed: October 2017). C. Ling, L. Du, X. Yuan, in AOPC 2020: Display Technology; Photonic MEMS, THz MEMS, and Metamaterials; and AI in Optics and Photonics, SPIE, Bellingham, WA 2020, pp. 138–143. M. Mirza, S. Osindero, arXiv 2014, 1784. X. Cheng, J. Li, Q. Dai, Z. Fu, J. Yang, IEEE Trans. Instrum. Meas. 2022, 71, 5007711. S. Yang, B.‐U. Lee, PLoS One 2015, 10, 0136964. A. K. Boyat, B. K. Joshi, presented at 2014 IEEE International Conference on Computational Intelligence and Computing Research, Coimbatore, India, (accessed: December 2014). W. H. Richardson, J. Opt. Soc. Am. 1972, 62, 55. L. B. Lucy, Astronomical J. 1974, 79, 745. C. Qiao, D. Li, Y. Guo, C. Liu, T. Jiang, Q. Dai, D. Li, Nat. Methods 2021, 18, 194. E. Xypakis, G. Gosti, T. Giordani, R. Santagati, G. Ruocco, M. Leonetti, Sci. Rep. 2022, 12, 8623. Y. Chen, Q. Liu, J. Zhang, Z. Ye, H. Ye, Y. Zhu, C. Kuang, Y. Chen, W. Liu, Opt. Express 2024, 32, 3316. X. Chen, C. Qiao, T. Jiang, J. Liu, Q. Meng, Y. Zeng, H. Chen, H. Qiao, D. Li, J. Wu, PhotoniX 2024, 5, 4. H. Wang, Y. Rivenson, Y. Jin, Z. Wei, R. Gao, H. Günaydın, L. A. Bentolila, C. Kural, A. Ozcan, in Biophotonics Congress: Biomedical Optics 2020 (Translational, Microscopy, OCT, OTS, BRAIN), Optica Publishing Group, Massachusetts, Washington 2020, p. MM3A4. C. Sun, A. Shrivastava, S. Singh, A. Gupta, presented at 2017 IEEE International Conference on Computer Vision (ICCV), Venice, Italy, (accessed: December 2017). C. N. Christensen, E. N. Ward, M. Lu, P. Lio, C. F. Kaminski, Biomed. Opt. Express 2021, 12, 2720. E. Agustsson, R. Timofte, presented at 2017 IEEE Conference on Computer Vision and Pattern Recognition Workshops, Honolulu, HI, USA, (accessed: July 2017). E. N. Ward, L. Hecker, C. N. Christensen, J. R. Lamb, M. Lu, L. Mascheroni, C. W. Chung, A. Wang, C. J. Rowlands, G. S. K. Schierle, C. F. Kaminski, Nat. Commun. 2022, 13, 7836. J. Wang, J. Fan, B. Zhou, X. Huang, L. Chen, Adv. Photonics Nexus 2023, 2, 016012. T. Liu, J. Niu, J. Liu, D. Li, S. Tan, Optics Lasers Eng. 2024, 173, 107913. I. Goodfellow, J. Pouget‐Abadie, M. Mirza, B. Xu, D. Warde‐Farley, S. Ozair, A. Courville, Y. Bengio, Commun. ACM 2020, 63, 139. S. Helgadottir, B. Midtvedt, J. Pineda, A. Sabirsh, C. B. Adiels, S. Romeo, D. Midtvedt, G. Volpe, Biophys. Rev. 2021, 2, 031401. X. Liu, J. Li, J. Li, N. Ali, T. Zhao, S. An, J. Zheng, Y. Ma, J. Qian, C. Zuo, P. Gao, Opt. Laser Technol. 2024, 170, 110224. J. Demmerle, C. Innocent, A. J. North, G. Ball, M. Müller, E. Miron, A. Matsuda, I. M. Dobbie, Y. Markaki, L. Schermelleh, Nat. Protoc. 2017, 12, 988. J. Lehtinen, J. Munkberg, J. Hasselgren, S. Laine, T. Karras, M. Aittala, T. Aila, in Proceedings of the 35th International Conference on Machine Learning, PMLR, NY, USA 2018, pp. 2965–2974. Y. Li, Y. Su, M. Guo, X. Han, J. Liu, H. D. Vishwasrao, X. Li, R. Christensen, T. Sengupta, M. W. Moyle, I. Rey‐Suarez, J. Chen, A. Upadhyaya, T. B. Usdin, D. A. Colón‐Ramos, H. Liu, Y. Wu, H. Shroff, Nat. Methods 2022, 19, 1427. A. Singh, S. Sengupta, V. Lakshminarayanan, J. Imag. 2020, 6, 52. M. T. M. Hannebelle, E. Raeth, S. M. Leitao, T. Lukeš, J. Pospíšil, C. Toniolo, O. F. Venzin, A. Chrisnandy, P. P. Swain, N. Ronceray, M. P. Lütolf, A. C. Oates, G. M. Hagen, T. Lasser, A. Radenovic, J. D. McKinney, G. E. Fantner, Nat. Commun. 2024, 15, 1550. R. F. Laine, G. Goodfellow, L. J. Young, J. Travers, D. Carroll, O. Dibben, H. Bright, C. F. Kaminski, eLife 2018, 7, 40183. A. Vaswani, N. Shazeer, N. Parmar, J. Uszkoreit, L. Jones, A. N. Gomez, Ł. Kaiser, I. Polosukhin, in Advances in Neural Information Processing Systems, Curran Associates Inc, Red Hook, NY, USA 2017, pp. 6000–6010. A. Dosovitskiy, L. Beyer, A. Kolesnikov, D. Weissenborn, X. Zhai, T. Unterthiner, M. Dehghani, M. Minderer, G. Heigold, S. Gelly, J. Uszkoreit, N. Houlsby, arXiv 2020. Z. H. Shah, M. Müller, W. Hübner, T.‐C. Wang, D. Telman, T. Huser, W. Schenck, GigaScience 2024, 13, giad109. Y. Zheng, J. Chen, C. Wu, W. Gong, K. Si, Cytometry, Part A 2021, 99, 622. T. Woo, S. H. Jung, C. Ahn, B. Hwang, H. Kim, J. H. Kang, J.‐H. Park, Optica 2020, 7, 973. M.‐A. Bray, S. Singh, H. Han, C. T. Davis, B. Borgeson, C. Hartland, M. Kost‐Alimova, S. M. Gustafsdottir, C. C. Gibson, A. E. Carpenter, Nat. Protoc. 2016, 11, 1757. N. Moshkov, M. Bornholdt, S. Benoit, M. Smith, C. McQuin, A. Goodman, R. A. Senft, Y. Han, M. Babadi, P. Horvath, B. A. Cimini, A. E. Carpenter, S. Singh, J. C. Caicedo, Nat. Commun. 2022, 15, 1594. N. Cerisier, B. Dafniet, A. Badel, O. Taboureau, Toxicol. Appl. Pharmacol. 2023, 461, 116407. R. Diekmann, D. L. Wolfson, C. Spahn, M. Heilemann, M. Schüttpelz, T. Huser, Nat. Commun. 2016, 7, 13711. D. Gong, C. Cai, A. Ashesh, G. Schlafly, P. J. L. Rivière, F. Jug, J. Chen, N. F. Scherer, in Three‐Dimensional and Multidimensional Microscopy: Image Acquisition and Processing, XXXI, SPIE, Bellingham, WA 2024, p. PC128480N. C. Ounkomol, S. Seshamani, M. M. Maleckar, F. Collman, G. R. Johnson, Nat. Methods 2018, 15, 917. Y. Jo, H. Cho, W. S. Park, G. Kim, D. Ryu, Y. S. Kim, M. Lee, S. Park, M. J. Lee, H. Joo, H. Jo, S. Lee, S. Lee, H. Min, W. D. Heo, Y. Park, Nat. Cell Biol. 2021, 23, 1329. E. Williams, J. Moore, S. W. Li, G. Rustici, A. Tarkowska, A. Chessel, S. Leo, B. Antal, R. K. Ferguson, U. Sarkans, A. Brazma, R. E. Carazo Salas, J. R. Swedlow, Nat. Methods 2017, 14, 775.
Grant Information:	2021YFF0700305 National Key Research and Development Program of China; 226-2024-00059 Fundamental Research Funds for the Central Universities; LZ23H180002 Zhejiang Provincial Natural Science Foundation; 2024C03056 Zhejiang Provincial Natural Science Foundation; 2022RC009 Zhejiang University K.P.Chao's High Technology Development Foundation
Contributed Indexing:	Keywords: artificial intelligence; deep learning; live‐cell imaging; structured illumination microscopy; super‐resolution imaging
Entry Date(s):	Date Created: 20250303 Date Completed: 20250524 Latest Revision: 20250530
Update Code:	20260130
DOI:	10.1002/smtd.202401616
PMID:	40025917
Βάση Δεδομένων:	MEDLINE

Περιγραφή
ISSN:	2366-9608
DOI:	10.1002/smtd.202401616