Missing value imputation methods for gene-sample-time microarray data analysis

Συγγραφείς: Li, Yifeng, Ngom, Alioune, Rueda, Luis

Πηγή: 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2010 IEEE Symposium on. :1-7 May, 2010

Relation: 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)

Feature selection for longitudinal microarray data by adapting a pathway analysis method

Συγγραφείς: Tian, Suyan, Wang, Chi, Chang, Howard H.

Θεματικοί όροι: Statistics - Methodology, Quantitative Biology - Quantitative Methods, Statistics - Applications

Σύνδεσμος πρόσβασης: http://arxiv.org/abs/1511.08272

Troubleshooting methods for microarray gene expression analysis in the onset of diabetic kidney disease

Συγγραφείς: Mazagova, Magdalena, Henning, Robert H., Duin, Marry, van Buiten, Azuwerus, Buikema, Hendrik, Deelman, Leo E. ^⁎

Πηγή: In Journal of Pharmacological and Toxicological Methods March-April 2013 67(2):61-68

A rapid and inexpensive labeling method for microarray gene expression analysis

Συγγραφείς: Ouellet, Mario

Θεματικοί όροι: Basic biological sciences, DNA, Complementary/genetics, Fluorescent Dyes, Gene Expression Profiling/methods, Oligonucleotide Array Sequence Analysis/methods, RNA, fungal/ genetics, saccharomyces cerevisiae/genetics, staining and labeling/methods

Περιγραφή αρχείου: application/pdf

Σύνδεσμος πρόσβασης: https://escholarship.org/uc/item/3pn1m4br
https://escholarship.org/content/qt3pn1m4br/qt3pn1m4br.pdf

Performance validation of microarray analysis methods

Συγγραφείς: Zervakis, M., Blazadonakis, M. E., Banti, A., Kafetzopoulos, D., Danilatou, V., Tsiknakis, M.

Πηγή: 2008 8th IEEE International Conference on BioInformatics and BioEngineering BioInformatics and BioEngineering, 2008. BIBE 2008. 8th IEEE International Conference on. :1-6 Oct, 2008

Relation: 2008 8th IEEE International Conference on Bioinformatics and BioEngineering (BIBE)

Developing and benchmarking microarray analysis methods

Συγγραφείς: Pearson, Richard Peter

Θεματικοί όροι: 572.8

Σύνδεσμος πρόσβασης: https://ethos.blethoshyku.com/concern/thesis_or_dissertations/549322

Comparison of High-Level Microarray Analysis Methods in the Context of Result Consistency.

Συγγραφείς: Chrominski K; University of Silesia, Institute of Computer Science, Division of Information Systems, Sosnowiec, Poland., Tkacz M; University of Silesia, Institute of Computer Science, Division of Information Systems, Sosnowiec, Poland.

Πηγή: PloS one [PLoS One] 2015 Jun 09; Vol. 10 (6), pp. e0128845. Date of Electronic Publication: 2015 Jun 09 (Print Publication: 2015).

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Microarray Analysis/*standards, Microarray Analysis/methods ; Data Accuracy ; Data Interpretation, Statistical ; Reproducibility of Results

Comparison of biological specimens and DNA collection methods for PCR amplification and microarray analysis

Συγγραφείς: Rethmeyer, Jasmine A.^{aff1_w2aab3b8c10b1b7b1aab1b4b5Aa}, Tan, Xiaoyu^{aff1_w2aab3b8c10b1b7b1aab1b4b5Aa}, Manzardo, Ann^{aff1_w2aab3b8c10b1b7b1aab1b4b5Aa}, Schroeder, Stephen R.^{aff2_w2aab3b8c10b1b7b1aab1b4b6Aa}, Butler, Merlin G.^{aff1_w2aab3b8c10b1b7b1aab1b4b5Aa}

Πηγή: Clinical Chemistry and Laboratory Medicine. 51(5):e79-e83

Διαθεσιμότητα: https://www.degruyter.com/document/doi/10.1515/cclm-2012-0429/html

Laplace Approximated EM Microarray Analysis: An Empirical Bayes Approach for Comparative Microarray Experiments

Συγγραφείς: Bar, Haim, Booth, James, Schifano, Elizabeth, Wells, Martin T.

Πηγή: Statistical Science, 2010 Aug 01. 25(3), 388-407.

Σύνδεσμος πρόσβασης: https://www.jstor.org/stable/41058954

A Concentration-Dependent Analysis Method for High Density Protein Microarrays
Concentration-Dependent Protein Microarray Analysis

Συγγραφείς: Marina, Ovidiu, Biernacki, Melinda A., Brusic, Vladimir, Wu, Catherine J.

Πηγή: Journal of Proteome Research. 7(5):2059-2068

Διαθεσιμότητα: https://pubs.acs.org/doi/10.1021/pr700892h

Investigating the Biomarkers for Alzheimer's Disease: Insights from Microarray Analysis, Mendelian Randomization, and Experimental Validation.

Συγγραφείς: Zhu Y; Department of Traditional Chinese Medicine, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, 200072, China., Jin X; Department of Traditional Chinese Medicine, Fengxian District Nanqiao Community Health Center, Shanghai, 201400, China., Liu J; Department of Traditional Chinese Medicine, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, 200072, China.

Πηγή: Current medicinal chemistry [Curr Med Chem] 2026; Vol. 33 (21), pp. 4316-4330.

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Bentham Science Publishers Country of Publication: United Arab Emirates NLM ID: 9440157 Publication Model: Print Cited Medium: Internet ISSN: 1875-533X (Electronic) Linking ISSN: 09298673 NLM ISO Abbreviation: Curr Med Chem Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Alzheimer Disease*/genetics , Alzheimer Disease*/diagnosis , Mendelian Randomization Analysis*, Biomarkers/analysis ; Biomarkers/metabolism ; Humans ; Oligonucleotide Array Sequence Analysis ; Gene Expression Profiling ; Microarray Analysis

Optimal Selection of Microarray Analysis Methods Using a Conceptual Clustering Algorithm

Συγγραφείς: Rubio Escudero, Cristina, Romero Zaliz, Rocío, Cordón, Óscar, Harari, Óscar, Val, Coral del, Zwir, Igor

Συνεισφορές: Lenguajes y Sistemas Informáticos, TIC-254: Data Science and Big Data Lab

Περιγραφή αρχείου: application/pdf

Relation: EvoWorkshops 2006: Workshops on Applications of Evolutionary Computation (2006), pp. 172-183.; https://link.springer.com/chapter/10.1007/11732242_16; Berlin, Germany; https://hdl.handle.net/11441/139997; https://doi.org/10.1007/11732242_16

Διαθεσιμότητα: https://hdl.handle.net/11441/139997
https://doi.org/10.1007/11732242_16

Benchmarking enrichment analysis methods with the disease pathway network

Συγγραφείς: Buzzao, Davide, 1996-, Author, Castresana-Aguirre, Miguel, Author, Guala, Dimitri, 1979-, Author, Sonnhammer, Erik L. L., 1964-, Author

Συνεισφορές: Buzzao, Davide, 1996-, Author, Castresana-Aguirre, Miguel, Author, Guala, Dimitri, 1979-, Author, Sonnhammer, Erik L. L., 1964-, Author

Πηγή: Briefings in Bioinformatics. 25(2)

Θεματικοί όροι: disease pathway network, functional enrichment, gene expression data, gene set enrichment analysis, pathway enrichment analysis, systems biology

Περιγραφή αρχείου: print

Σύνδεσμος πρόσβασης: https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-235218
https://doi.org/10.1093/bib/bbae069

Application of Volcano Plots in Analyses of mRNA Differential Expressions with Microarrays

Συγγραφείς: Li, Wentian

Πηγή: Journal of Bioinformatics and Computational Biology, 10:1231003 (2012)

Θεματικοί όροι: Quantitative Biology - Quantitative Methods, Quantitative Biology - Genomics

Σύνδεσμος πρόσβασης: http://arxiv.org/abs/1103.3434

Pathway-centric approaches to the analysis of high-throughput genomics data

Συγγραφείς: Hänzelmann, Sonja

Συνεισφορές: University/Department: Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut

Thesis Advisors: Castelo Valdueza, Robert

Πηγή: TDX (Tesis Doctorals en Xarxa)

Θεματικοί όροι: Functional Genomics, Systems Biology, Network Biology, Microarray analysis, RNA-seq, Drug repurposing, Diabetes, Gene Set Enrichment Analysis, Reverse-engineering of networks, Genòmica funcional, Biologia de sistemes, Biologia de xarxes, Anàlisi de microarray, Seqüenciació d'ARN, Reutilització de medicaments, Diabetis, Anàlisi d'enriquiment de conjunts de gens, Inferència de xarxes

Περιγραφή αρχείου: application/pdf

Σύνδεσμος πρόσβασης: http://hdl.handle.net/10803/108337

Repeated Measurements on Distinct Scales With Censoring—A Bayesian Approach Applied to Microarray Analysis of Maize

Συγγραφείς: Love, Tanzy, Carriquiry, Alicia

Πηγή: Journal of the American Statistical Association, 2009 Jun 01. 104(486), 524-540.

Σύνδεσμος πρόσβασης: https://www.jstor.org/stable/40592203

Exploration of copy number variations and candidate genes in fetal congenital heart disease using chromosomal microarray analysis

Συγγραφείς: Yao, Di^{j_jpm-2024-0599_aff_002}, Xia, Ruyu^{j_jpm-2024-0599_aff_002}, Jiang, Xu^{j_jpm-2024-0599_aff_002}, Guo, Caiqin^{j_jpm-2024-0599_aff_001}, Shi, Nan^{j_jpm-2024-0599_aff_001}, Tao, Hehua^{j_jpm-2024-0599_aff_001}, Yang, Lan^{j_jpm-2024-0599_aff_001}

Πηγή: Journal of Perinatal Medicine. 53(7):908-921

Διαθεσιμότητα: https://www.degruyter.com/document/doi/10.1515/jpm-2024-0599/html

A comprehensive survey on computational learning methods for analysis of gene expression data

Συγγραφείς: Bhandari, Nikita, Walambe, Rahee, Kotecha, Ketan, Khare, Satyajeet

Θεματικοί όροι: Quantitative Biology - Genomics, Computer Science - Artificial Intelligence, Computer Science - Machine Learning

Σύνδεσμος πρόσβασης: http://arxiv.org/abs/2202.02958

Adaptation to Famine: A Family of Stationary-Phase Genes Revealed by Microarray Analysis

Συγγραφείς: Tani, Travis H., Khodursky, Arkady, Blumenthal, Robert M., Brown, Patrick O., Matthews, Rowena G.

Πηγή: Proceedings of the National Academy of Sciences of the United States of America, 2002 Oct . 99(21), 13471-13476.

Σύνδεσμος πρόσβασης: https://www.jstor.org/stable/3073430

Functional immunomics: Microarray analysis of IgG autoantibody repertoires predicts the future response of NOD mice to an inducer of accelerated diabetes

Συγγραφείς: Quintana, Francisco J., Hagedorn, Peter H., Elizur, Gad, Marbel, Yifat, Domany, Eytan, Cohen, Irun R.

Θεματικοί όροι: Quantitative Biology - Tissues and Organs, Quantitative Biology - Quantitative Methods

Σύνδεσμος πρόσβασης: http://arxiv.org/abs/q-bio/0409018