Investigating the Mechanistic of Danhong Injection in Brain Damage Caused by Cardiac I/R Injury via Bioinformatics, Computer Simulation, and Experimental Validation

Συγγραφείς: Wang, Jinfu^aff1, Guo, Yan^aff2, Zhou, Huifen^{aff1, aff3}, Hua, Yanjie^aff4, Wan, Haitong^{aff1, aff3}, Yang, Jiehong^{aff1, aff3}

Πηγή: ACS Omega. 9(16):18341-18357

Διαθεσιμότητα: https://pubs.acs.org/doi/10.1021/acsomega.4c00200

Investigating the Mechanistic of Danhong Injection in Brain Damage Caused by Cardiac I/R Injury via Bioinformatics, Computer Simulation, and Experimental Validation

Σύνδεσμος πρόσβασης: https://doi.org/10.1021/acsomega.4c00200.s001

Xiaoyao San and Guipi Tang, alone or combined, relieve postpartum depression via AGE‑RAGE‑mediated autophagy and apoptosis

Συγγραφείς: Li, Shengqi ^{a, 1}, Guo, Yuhao ^{b, 1}, Zhang, Jiayi ^{a, 1}, Zhang, Rui ^{c, ⁎}, Li, Yongle ^{a, ⁎}

Πηγή: In Phytomedicine 25 November 2025 148

Antioxidative Properties of Usnic Acid and Its Interaction with Tyrosyl-DNA Phosphodiesterase

Συγγραφείς: Đorović, Jelena^Aff5, Marković, Zoran^{Aff5, Aff6}

Συνεισφορές: Tsihrintzis, George A., Series Editor^Aff1, Virvou, Maria, Series Editor^Aff2, Jain, Lakhmi C., Series Editor^Aff3, Filipovic, Nenad, editor^Aff4

Πηγή: Computational Bioengineering and Bioinformatics : Computer Modelling in Bioengineering. 11:80-91

Tuning Cooperativity of Calcium Activation in Cardiac Muscle

Συγγραφείς: Prodanovic, Momcilo^{Aff5, Aff6}, Stojanovic, Boban^{Aff5, Aff7}, Maric, Mladen^{Aff5, Aff7}, Prodanovic, Danica^{Aff5, Aff7}, Mijailovich, Srboljub M.^Aff8

Συνεισφορές: Tsihrintzis, George A., Series Editor^Aff1, Virvou, Maria, Series Editor^Aff2, Jain, Lakhmi C., Series Editor^Aff3, Filipovic, Nenad, editor^Aff4

Πηγή: Computational Bioengineering and Bioinformatics : Computer Modelling in Bioengineering. 11:53-63

Advanced Modelling Approach of Carotid Artery Atherosclerosis

Συγγραφείς: Djorovic, Smiljana^{Aff5, Aff6}, Saveljic, Igor^{Aff5, Aff6}, Filipovic, Nenad^{Aff5, Aff6}

Συνεισφορές: Tsihrintzis, George A., Series Editor^Aff1, Virvou, Maria, Series Editor^Aff2, Jain, Lakhmi C., Series Editor^Aff3, Filipovic, Nenad, editor^Aff4

Πηγή: Computational Bioengineering and Bioinformatics : Computer Modelling in Bioengineering. 11:143-150

β-Sitosterol modulates osteogenic and adipogenic balance in BMSCs to suppress osteoporosis via regulating mTOR-IMP1-Adipoq axis

Συγγραφείς: Li, Hao ^{a, b}, Gong, Ying ^c, Wang, Yanna ^a, Sang, Wanyu ^{a, b}, Wang, Changyuan ^a, Zhang, Yukun ^d, Zhang, Hanrui ^a, Liu, Peixuan ^a, Liu, Mozhen ^{c, ⁎}, Sun, Huijun ^{a, b, ⁎⁎}

Πηγή: In Phytomedicine March 2025 138

Controlled hydrolysis and EGCG conjugation enhance the ADH/ALDH activation activity of chia seed meal protein hydrolysates: Fabrication and structural characterization.

Συγγραφείς: Chen J; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China., Ge W; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China., Wang Y; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China., Hu Z; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China., Lv W; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China., Ma C; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China. Electronic address: machaoyang24@jiangnan.edu.cn., Wang H; State Key Laboratory of Food Science and Resource, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China. Electronic address: hxwang@jiangnan.edu.cn.

Πηγή: Food chemistry [Food Chem] 2025 Jun 01; Vol. 476, pp. 143386. Date of Electronic Publication: 2025 Feb 11.

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Elsevier Applied Science Publishers Country of Publication: England NLM ID: 7702639 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-7072 (Electronic) Linking ISSN: 03088146 NLM ISO Abbreviation: Food Chem Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Protein Hydrolysates*/chemistry , Catechin*/chemistry , Catechin*/analogs & derivatives , Plant Proteins*/chemistry , Alcohol Dehydrogenase*/chemistry , Alcohol Dehydrogenase*/metabolism , Aldehyde Dehydrogenase*/chemistry , Aldehyde Dehydrogenase*/metabolism , Salvia*/chemistry, Seeds/chemistry ; Hydrolysis ; Enzyme Activation ; Molecular Docking Simulation ; Plant Extracts ; Salvia hispanica

Antioxidant Activity In Vitro and Protective Effects Against Lipopolysaccharide-Induced Oxidative Stress and Inflammation in RAW264.7 Cells of Ulva prolifera -Derived Bioactive Peptides Identified by Virtual Screening, Molecular Docking, and Dynamics Simulations

Συγγραφείς: Liu, Jiasi, Li, Zhiyong, Gu, Huiyue, Shen, Songdong

Πηγή: Foods; Jul2025, Vol. 14 Issue 13, p2202, 20p

Θεματικοί όροι: Antioxidants, Oxidative stress, Dietary bioactive peptides, Inflammation, Molecular docking, In vitro studies, Macrophages, Green algae

Computational Modeling in Bioengineering and Bioinformatics

Συγγραφείς: Nenad Filipovic

Resource Type: eBook.

Θέματα: Biomedical engineering--Computer simulation, Bioinformatics--Computer simulation, Biomedical Engineering, Computer Simulation

Categories: SCIENCE / Biotechnology, TECHNOLOGY & ENGINEERING / Biomedical

Identification of a possible sequence of structural events associated with genome evolution

Συγγραφείς: Dakurah, Ottovon Bismark

Συνεισφορές: Patterton, Hugh-George, Stellenbosch University. Faculty of Science. Centre for Bioinformatics and Computational Biology.

Θεματικοί όροι: Genomics, Comparative genomics, Saccharomyces cerevisiae -- Genetics -- Computer simulation, Genomes -- Evolution -- Mathematical models, Bioinformatics -- Computer simulation, Computational biology -- Mathematical models, UCTD

Περιγραφή αρχείου: xv, 181 pages : illustrations; application/pdf

Relation: https://scholar.sun.ac.za/handle/10019.1/134581

Διαθεσιμότητα: https://scholar.sun.ac.za/handle/10019.1/134581

The interdisciplinary approach to investigate bona fide agent(s) in flavonoids or alkaloids in treating HCC.

Συγγραφείς: Oh KK; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Yoon SJ; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Song SH; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Park JH; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Kim JS; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Kim MJ; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Kwon GH; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Kim DJ; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea., Suk KT; College of Medicine, Institute for Liver and Digestive Diseases, Hallym University, Chuncheon, South Korea.

Πηγή: Artificial cells, nanomedicine, and biotechnology [Artif Cells Nanomed Biotechnol] 2024 Dec; Vol. 52 (1), pp. 500-511. Date of Electronic Publication: 2024 Oct 10.

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Taylor & Francis Country of Publication: England NLM ID: 101594777 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2169-141X (Electronic) Linking ISSN: 21691401 NLM ISO Abbreviation: Artif Cells Nanomed Biotechnol Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Flavonoids*/chemistry , Flavonoids*/pharmacology , Flavonoids*/therapeutic use , Carcinoma, Hepatocellular*/drug therapy , Carcinoma, Hepatocellular*/metabolism , Liver Neoplasms*/drug therapy , Liver Neoplasms*/metabolism , Liver Neoplasms*/pathology , Alkaloids*/chemistry , Alkaloids*/therapeutic use , Alkaloids*/pharmacology, Antineoplastic Agents/chemistry ; Antineoplastic Agents/pharmacology ; Antineoplastic Agents/therapeutic use ; Protein Interaction Maps/drug effects ; Humans ; Molecular Docking Simulation

Novel scaffolds identification against Mpro of SARS-CoV-2 using shape based screening and molecular simulation methods

Συγγραφείς: Gupta, Pawan ^{a, ⁎}, Panwar, Umesh ^b, Singh, Sanjeev ^{b, c, ⁎⁎}

Πηγή: In Chemical Physics Impact June 2024 8

Computational Genomics with R

Συγγραφείς: Altuna Akalin

Resource Type: eBook.

Θέματα: R (Computer program language), Genomics--Data processing, Computational biology, Bioinformatics--Computer simulation

Categories: SCIENCE / Bioinformatics, COMPUTERS / Data Science / Machine Learning

IDENTIFICATION OF THERAPEUTIC TARGETS FOR POLYCYSTIC OVARY SYNDROME USING NETWORK PHARMACOLOGY AND COMPUTER SIMULATIONS.

Συγγραφείς: ZAFAR, ISHA, MALIK, MUNAZZAH, MUBASHER, MIAN MUHAMMAD, TARIQ, MUHAMMAD, ALI, QURBAN, AHMAD, AJAZ, BILAL, MUHAMMAD, HAN, SHIMING

Πηγή: Farmacia; Jul/Aug2024, Vol. 72 Issue 4, p893-905, 13p

Θεματικοί όροι: Polyendocrine metabolic ovarian syndrome, Molecular dynamics, Molecular docking, Protein-protein interactions, Computer networks

Combination of omics, bioinformatics, molecular docking, and experimental validation to elucidate the hepatoprotective effects, mechanisms, and active compounds of Shandougen.

Συγγραφείς: Zhang SN; College of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guian New Area, China., Liu Q; The Research Institute of Medicine and Pharmacy, Qiqihar Medical University, Qiqihar, China., Li XZ; College of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guian New Area, China.

Πηγή: Biomedical chromatography : BMC [Biomed Chromatogr] 2024 Jul; Vol. 38 (7), pp. e5887. Date of Electronic Publication: 2024 May 15.

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Wiley Country of Publication: England NLM ID: 8610241 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1099-0801 (Electronic) Linking ISSN: 02693879 NLM ISO Abbreviation: Biomed Chromatogr Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Molecular Docking Simulation* , Computational Biology*, Liver/drug effects ; Liver/metabolism ; Protective Agents/pharmacology ; Protective Agents/chemistry ; Liver Cirrhosis/drug therapy ; Liver Cirrhosis/metabolism ; Gallic Acid/chemistry ; Gallic Acid/pharmacology ; Triterpenes/chemistry ; Triterpenes/pharmacology ; Proteomics/methods ; Drugs, Chinese Herbal/pharmacology ; Drugs, Chinese Herbal/chemistry ; Animals ; Male ; Rats ; Carbon Tetrachloride

Anti-Melanogenic Activity of Ethanolic Extract from Garcinia atroviridis Fruits Using In Vitro Experiments, Network Pharmacology, Molecular Docking, and Molecular Dynamics Simulation.

Συγγραφείς: Tedasen, Aman, Chiabchalard, Anchalee, Tencomnao, Tewin, Yamasaki, Kenshi, Majima, Hideyuki J., Phongphithakchai, Atthaphong, Chatatikun, Moragot

Πηγή: Antioxidants; Jun2024, Vol. 13 Issue 6, p713, 29p

Θεματικοί όροι: Fruit extracts, Molecular dynamics, Molecular docking, Human skin color, Garcinia, Protein-ligand interactions

Towards data warehousing and mining of protein unfolding simulation data.

Συγγραφείς: Berrar D; School of Biomedical Sciences, University of Ulster, Coleraine, Coleraine, Northern Ireland Cromore Road, BT52 1SA, Coleraine, Northern Ireland. dp.berrar@ulster.ac.uk, Stahl F, Silva C, Rodrigues JR, Brito RM, Dubitzky W

Πηγή: Journal of clinical monitoring and computing [J Clin Monit Comput] 2005 Oct; Vol. 19 (4-5), pp. 307-17.

Τύπος έκδοσης: Journal Article

Στοιχεία περιοδικού: Publisher: Springer Country of Publication: Netherlands NLM ID: 9806357 Publication Model: Print Cited Medium: Print ISSN: 1387-1307 (Print) Linking ISSN: 13871307 NLM ISO Abbreviation: J Clin Monit Comput Subsets: MEDLINE

Ιατρικοί όροι (MeSH): Computer Simulation* , Information Storage and Retrieval* , Protein Folding*, Computational Biology ; Protein Conformation

Large Crowd Dynamics: A Novel Crowd Simulator Using Potential Fields

Συγγραφείς: Lu, Guanghui, Tan, Hao, Luo, Weiping

Πηγή: 2010 International Conference on Biomedical Engineering and Computer Science Biomedical Engineering and Computer Science (ICBECS), 2010 International Conference on. :1-4 Apr, 2010

Relation: 2010 International Conference on Biomedical Engineering and Computer Science (ICBECS)

Towards Data Warehousing and Mining of Protein Unfolding Simulation Data.

Συγγραφείς: Daniel Berrar, Frederic Stahl, Candida Silva, J. Rodrigues, Rui Brito, Werner Dubitzky

Πηγή: Journal of Clinical Monitoring & Computing; Oct2005, Vol. 19 Issue 4/5, p307-317, 11p