Inflammation and gut barrier function-related genes and colorectal cancer risk in western European populations

Authors: Mandle, Hannah B., Jenab, Mazda, Gunter, Marc J., Tjønneland, Anne, Olsen, Anja, Dahm, Christina C., Zhang, Jie, Sugier, Pierre-Emmanuel, Rothwell, Joseph, Severi, Gianluca, Kaaks, Rudolf, Katzke, Verena A., Schulze, Matthias B., Masala, Giovanna, Sieri, Sabina, Panico, Salvatore, Sacerdote, Carlotta, Bonet, Catalina, Sanchez, Maria-Jose, Amiano, Pilar, Huerta, Jose Maria, Guevara, Marcela, Palmqvist, Richard, Löwenmark, Thyra, 1995, Perez-Cornago, Aurora, Weiderpass, Elisabete, Heath, Alicia K., Cross, Amanda J., Vineis, Paolo, Hughes, David J., Fedirko, Veronika

Source: Mutagenesis. 40(1):48-60

Subject Terms: single nucleotide polymorphism, gut barrier, inflammation, colorectal neoplasms, incidence

File Description: electronic

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-228709
https://doi.org/10.1093/mutage/geae008

Genetic Polymorphisms in Nuclear Receptors Drive Variations in Responses to Environmental Exposures

Authors: Zuo, Shaoqi^aff1, Zhang, Kun^aff1, Dai, Jiayin^aff1, Fent, Karl^aff2, Huang, August Yue^aff3, Zhao, Yanbin^aff1

Source: Environmental Science & Technology. 59(37):19733-19744

Availability: https://pubs.acs.org/doi/10.1021/acs.est.5c08097

Constant Temperature Electrochemical Biosensor for SNP Detection in Human Genomic DNA Based on DNA Melting Analysis

Authors: Serapinas, Skomantas^aff1, Stakelytė, Deimantė^aff1, Tučinskytė, Kornelija^aff2, Tomkuvienė, Miglė^aff2, Dagys, Marius^aff1, Ratautas, Dalius^aff1

Source: ACS Sensors. 10(9):6819-6827

Availability: https://pubs.acs.org/doi/10.1021/acssensors.5c01577

Integration of CRISPR/Cas12a and a Fiber Optic Particle Plasmon Resonance Sensor for Single Nucleotide Polymorphism Detection in an Aldehyde Dehydrogenase 2 Gene

Authors: Thi Pham, Nhan^aff1, Wang, Chih-Hsien^{aff1, aff2}, Chen, Che-Hong^aff3, Tseng, Yen-Ta^{aff1, aff2}, Guthula, Lakshmi Sujatha^aff1, Chau, Lai-Kwan^{aff1, aff2}, Yu, Chun-Ying^{aff2, aff4}, Chen, Yen-Ling^{aff1, aff2, aff5, aff6}

Source: ACS Sensors. 10(7):5047-5055

Availability: https://pubs.acs.org/doi/10.1021/acssensors.5c01035

Reduced-Representation Sequencing Detects Trans-Arctic Connectivity and Local Adaptation in Polar Cod (Boreogadus saida)

Authors: Maes, Sarah M., Verheye, Marie L., Bouchard, Caroline, Geslain, Enora, Hellemans, Bart, Johansen, Torild, Lucassen, Magnus, Mark, Felix C., Ólafsdóttir, Anna H., Snoeijs Leijonmalm, Pauline, 1956, Zelenina, Daria, Volckaert, Filip A. M., Christiansen, Henrik, Flores, Hauke

Source: Molecular Ecology. 34(7)

Subject Terms: Arctic Ocean, fish, Gadidae, polar cod, population genomics, sea ice, seascape, single nucleotide polymorphism

File Description: print

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-242559
https://doi.org/10.1111/mec.17706

Significance of Gene Polymorphism and Gene Expression of BACE2 in Swedish Patients with Colorectal Cancer

Authors: Dimberg, Jan, Shamoun, Levar, af Geijerstam, Kristin, Landerholm, Kalle, Wågsäter, Dick

Source: Oncology. 103(1):48-55

Subject Terms: BACE2, Single nucleotide polymorphism, Colorectal cancer, Clinical parameters

File Description: print

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:hj:diva-66081
https://doi.org/10.1159/000540887

Association of Clinicopathological Factors With MMP13 (rs2252070) Gene Polymorphism in Swedish Patients With Colorectal Cancer

Authors: van Nguyen, Song, Shamoun, Levar, Landerholm, Kalle, Wågsäter, Dick, Dimberg, Jan

Source: In Vivo. 38(4):1775-1782

Subject Terms: clinical parameters, colorectal cancer, MMP13, SNP, Adult, Aged, 80 and over, Alleles, Biomarkers, Tumor, Carcinoembryonic Antigen, Colorectal Neoplasms, Female, Genetic Association Studies, Genetic Predisposition to Disease, Genotype, Humans, Kaplan-Meier Estimate, Male, Matrix Metalloproteinase 13, Middle Aged, Neoplasm Staging, Polymorphism, Single Nucleotide, Prognosis, Sweden, collagenase 3, MMP13 protein, human, tumor marker, allele, antigen blood level, Article, cancer patient, cancer prevention, cancer specific survival, clinical feature, colorectal adenocarcinoma, controlled study, DNA polymorphism, follow up, genetic association, genotyping, histopathology, human tissue, long term survival, lymph node, lymph vessel metastasis, major clinical study, perineural invasion, polymerase chain reaction, single nucleotide polymorphism, Swedish citizen, tumor differentiation, tumor volume, very elderly, blood, cancer staging, colorectal tumor, epidemiology, genetic association study, genetic predisposition, genetics, Kaplan Meier method, mortality, pathology

File Description: print

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:hj:diva-65694
https://doi.org/10.21873/invivo.13628

In-Silico Approach for Finding Consistent Deleterious Non-Synonymous SNPs in Diabetes Mellitus

Authors: Khan, Rahemeen

Source: 2024 26th International Multi-Topic Conference (INMIC) Multitopic Conference (INMIC), 2024 26th International. :1-6 Dec, 2024

Relation: 2024 26th International Multitopic Conference (INMIC)

A Particle Swarm Optimization Algorithm Based on Multi-Population Mutual Learning for SNP-SNP Interaction Detection

Authors: Zhao, Linqian, Li, Yahan, Shang, Junliang, Ren, Qianqian, Zhang, Yuanyuan, Liu, Jin-Xing

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :591-596 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Multi-Population Ant Colony Optimization With Knowledge-Based Local Searches for Epistasis Detection

Authors: Ren, Qianqian, Liu, Shaoyi, Zhang, Lianlian, Shang, Junliang, Li, Feng

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :639-642 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

BDNF Val66Met polymorphism moderates associations between physical activity and neurocognitive outcomes in older adults

Authors: Cadwallader, Claire J, VandeBunte, Anna M, Fischer, D Luke, Chen, Coty, Diaz, Valentina E, Lee, Shannon Y, Chan, Brandon, Lario‐Lago, Argentina, Rojas, Julio C, Ramos, Eliana Marisa, Rexach, Jessica E, Yokoyama, Jennifer S, Kramer, Joel H, Paolillo, Emily W, Saloner, Rowan, Casaletto, Kaitlin B

Source: Alzheimer's & Dementia: Translational Research & Clinical Interventions. 11(2)

Subject Terms: 32 Biomedical and Clinical Sciences (for-2020), 5201 Applied and Developmental Psychology (for-2020), 5202 Biological Psychology (for-2020), 5203 Clinical and Health Psychology (for-2020), 3202 Clinical Sciences (for-2020), 52 Psychology (for-2020), Dementia (rcdc), Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) (rcdc), Behavioral and Social Science (rcdc), Neurodegenerative (rcdc), Alzheimer's Disease (rcdc), Genetics (rcdc), Brain Disorders (rcdc), Neurosciences (rcdc), Aging (rcdc), Acquired Cognitive Impairment (rcdc), Prevention (rcdc), Physical Activity (rcdc), Neurological (hrcs-hc), Mental health (hrcs-hc), Alzheimer's disease, BDNF Val66Met single-nucleotide polymorphism, cognition, healthy aging, GFAP, physical activity, plasma biomarkers, p-tau 181, Rs6265, sex differences, Alzheimer's disease, BDNF Val66Met single‐nucleotide polymorphism, GFAP, Rs6265, cognition, healthy aging, physical activity, plasma biomarkers, p‐tau 181, sex differences, 3202 Clinical sciences (for-2020), 3209 Neurosciences (for-2020), 5202 Biological psychology (for-2020)

Access URL: https://escholarship.org/uc/item/9873s09b

Advancing Goat Genomics Verification and Applying GBTS Liquid Chip for Precision Breeding

Authors: Umar Aziz, Abdul Rehman, Xiaolong Xu, Junru Zhu, Yonglong He, Zhanhang Wang, Li Fu, Fasih Ur Rehman, Jiayuan Li, Xugan Wang, Hanbing Yan, Xiaopeng An

Source: Journal of Veterinary Physiology and Pathology; Vol. 4 No. 3 (2025); 20-30

Subject Terms: Single-nucleotide polymorphism, Genomic selection, Milk goat genomic, Genotyping by target sequencing, Liquid chip, Breeding, Genetic marker

File Description: application/pdf; text/xml

Access URL: https://jvpp.rovedar.com/index.php/JVPP/article/view/60

Neuropeptide S pathway in PTSD and neuropsychiatric disorders: A review

Authors: Zhi-cheng Zhu, Xue-jing Han, Zhen He, Meng-yang Liu, Ning Wu, Xiang-min Tong, Fei Li

Source: Biomolecules & Biomedicine (2025)

Subject Terms: Post-traumatic stress disorder, single nucleotide polymorphism, QH301-705.5, neuropeptide S, Biology (General), neuropeptide S receptor, related neuropsychiatric disorders

Access URL: https://doaj.org/article/5ebe2856646b4db9bc90d03cc97b2067

Detection of single nucleotide polymorphisms associated with litter size in goats using genotyping-by-sequencing and association analysis

Authors: Satoshi Kubota, Thara Wongdee, Pramote Paengkoum

Source: Anim Biosci
Animal Bioscience, Vol 38, Iss 8, Pp 1580-1593 (2025)

Subject Terms: goat doe reproduction traits, QL1-991, single nucleotide polymorphism, polymerase chain reaction allele competitive extension genotyping, genotyping by sequencing, litter size, Zoology, association analysis, Article

Access URL: https://doaj.org/article/2e767cf48fb44de68f3196f067766a03

Polymorphic variant of NQO1 rs1800566 and antipsychotic-induced metabolic disorders in patients with schizophrenia

Authors: V. V. Tiguntsev, I. A. Mednova, I. V. Pozhidaev, E. V. Mikhalitskaya, D. A. Petkun, N. M. Vyalova, D. Z. Paderina, E. G. Kornetova, S. A. Ivanova

Source: Бюллетень сибирской медицины, Vol 24, Iss 2, Pp 98-105 (2025)

Subject Terms: schizophrenia, antipsychotics, single nucleotide polymorphism, adverse effects of therapy, molecular genetics, metabolic disorders, Medicine, nqo1

Access URL: https://doaj.org/article/eb950e5918be401c94c212884b9b5d0f

Association of plasma TGF-β1 levels with polymorphic loci and TGFB1 haplotypes rs1800469 and rs1800470 in pediatric liver transplant recipients

Authors: R. M. Kurabekova, O. M. Tsirulnikova, O. E. Gichkun, I. E. Pashkova, O. P. Shevchenko

Source: Вестник трансплантологии и искусственных органов, Vol 27, Iss 2, Pp 179-188 (2025)

Subject Terms: RD1-811, single nucleotide polymorphism, biliary atresia and hypoplasia, profibrogenic cytokine, Surgery, congenital liver diseases

Access URL: https://doaj.org/article/c2faa029baa044b09312d70363e6fa94

Identification of a set of SNPs markers for parentage analysis of the mediterranean red coral (Corallium rubrum)

Authors: Giordano, Bruna, Daric, Vladimir, Bramanti, Lorenzo, Delcamp, Adline, Guichoux, Erwan, Cannas, Rita, Guizien, Katell

Contributors: Guizien, Katell

Source: Conservation Genetics Resources. 17:151-154

Subject Terms: [SDE.BE] Environmental Sciences/Biodiversity and Ecology, Genotyping, MassARRAY, RNA-seq, Cnidarian, Corallium rubrum, Single nucleotide polymorphism

File Description: application/pdf

A novel missense single-nucleotide polymorphism (c.149G>A) in the bovine leptin gene and its association with growth traits in Madura cattle

Authors: Kuswati Kuswati, Irida Novianti, Rizki Prafitri, Wike Andre Septian, Rafika Febriani Putri, Chairdin Dwi Nugraha, Ahmad Furqon

Source: Veterinary World, Vol 18, Iss 7, Pp 2072-2077 (2025)

Subject Terms: leptin gene, molecular marker, c.149g>a, madura cattle, missense mutation, Veterinary medicine, SF600-1100, single-nucleotide polymorphism, growth traits, SF1-1100, Animal culture

Access URL: https://doaj.org/article/d4b895938e2f46309fff6a9ee30e0365

AXIN1 Polymorphisms Potentially Modulate Parkinson’s Disease Susceptibility: A Cross-Sectional Study in Northern Han Chinese and White Populations

Authors: Kong, Zhen^{Aff1, Aff2}, Yu, Ran^{Aff1, Aff2}, Li, Chengqian^{Aff1, Aff3}, He, Qiqing^{Aff1, Aff2}, Zhou, Yuting^{Aff1, Aff2}, Zhang, Xue, Li, Yaqing^{Aff2, Aff5, IDs40120025008641_cor1}, Xie, Anmu^{Aff1, Aff2, IDs40120025008641_cor2}, Hou, Binghui^{Aff1, IDs40120025008641_cor3}

Source: Neurology and Therapy. :1-19

ABCB1 and ABCC10 polymorphisms predict sensitivity to first- and third-generation EGFR-TKIs in EGFR-mutant NSCLC

Authors: Toda-Shiraga, Sanae, Uemura, Takehiro^{Aff1, IDs10637025015949_cor1}, Kakihara, Akihito, Hashiba, Fumitaka, Tanaka, Tatsuya, Ito, Toshiyasu, Onuki, Tomohiro, Ito, Keima, Mori, Yuta, Fukumitsu, Kensuke, Fukuda, Satoshi, Kanemitsu, Yoshihiro, Tajiri, Tomoko, Ohkubo, Hirotsugu, Maeno, Ken, Niimi, Akio, Oguri, Tetsuya^{Aff1, Aff2}

Source: Investigational New Drugs: Novel Anti-Cancer Therapeutics and Therapies. :1-13