The gray area of RQ-PCR-based measurable residual disease: subdividing the 'positive, below quantitative range' category: subdividing the “positive, below quantitative range” category

Authors: Kotrova, Michaela, Fronkova, Eva, Svaton, Michael, Drandi, Daniela, Schön, Felix, Hoogeveen, Patricia, Hancock, Jeremy, Skotnicova, Aneta, Schilhabel, Anke, Eckert, Cornelia, Clappier, Emmanuelle, Cazzaniga, Gianni, Schäfer, Beat W, van Dongen, Jacques J M, Ritgen, Matthias, Pott, Christiane, van der Velden, Vincent H J, Trka, Jan, Brüggemann, Monika

Contributors: University of Zurich, Brüggemann, Monika

Source: Leukemia
Leukemia 38(7), 1617-1620. (2024)

Subject Terms: measurable residual disease, Letter, Neoplasm, Residual, 2720 Hematology, 610 Medicine & health, Real-Time Polymerase Chain Reaction, 692/308/575, 45/77, 692/308/2056, Humans [MeSH], letter, 45/23, Neoplasm, Residual/diagnosis [MeSH], Neoplasm, Residual/genetics [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], Real-time quantitative PCR, Humans, SDG 3 - Good Health and Well-being, 10036 Medical Clinic, 2730 Oncology, 1306 Cancer Research, T-cell receptor, immunoglobulin

File Description: application/pdf; ZORA_270348.pdf - application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/38760480
https://pure.eur.nl/en/publications/42b9bc5f-6a62-437b-918d-f3bdccb38f25
https://doi.org/10.1038/s41375-024-02265-z
https://hdl.handle.net/20.500.14178/2583
https://repository.publisso.de/resource/frl:6503052
https://hdl.handle.net/2318/2037390
https://doi.org/10.1038/s41375-024-02265-z

Analysis of measurable residual disease by IG/TR gene rearrangements: quality assurance and updated EuroMRD guidelines: quality assurance and updated EuroMRD guidelines

Authors: van der Velden, Vincent, Dombrink, Isabel, Alten, Julia, Cazzaniga, Giovanni, Clappier, Emmanuelle, Drandi, Daniela, Eckert, Cornelia, Fronkova, Eva, Hancock, Jeremy, Kotrová, Michaela, Kraemer, Rebekka, Montonen, Mirkka, Pfeifer, Heike, Pott, Christiane, Raff, Thorsten, Trautmann, Heiko, Cavé, Hélène, Schafer, Beat, van Dongen, Jacques J.M., Trka, Jan, Brüggemann, Monika, EuroMRD Consortium, van der Velden, Vincent H. J., van Dongen, Jacques J. M.

Source: Leukemia

Subject Terms: Gene Rearrangement, Neoplasm, Residual, Genes, Immunoglobulin, Quality Assurance, Health Care, Precursor Cell Lymphoblastic Leukemia-Lymphoma, Real-Time Polymerase Chain Reaction, 16. Peace & justice, Genes, Immunoglobulin [MeSH], Precursor Cell Lymphoblastic Leukemia-Lymphoma/diagnosis [MeSH], Humans [MeSH], 692/700/139, Neoplasm, Residual/diagnosis [MeSH], Practice Guidelines as Topic/standards [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], 692/700/139/1512, Article, Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics [MeSH], Quality Assurance, Health Care [MeSH], 45/77, Gene Rearrangement [MeSH], Neoplasm, Residual/genetics [MeSH], Real-Time Polymerase Chain Reaction/standards [MeSH], article, 3. Good health, SDG 3 - Good Health and Well-being, Practice Guidelines as Topic, Humans, minimal residual disease, IG/TR rearrangements, lymphoproliferative disorders

File Description: application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/38744919
https://pure.eur.nl/en/publications/62a82ac1-33d1-4b8a-85c8-a5378adaa017
https://doi.org/10.1038/s41375-024-02272-0
https://hdl.handle.net/10281/535869
https://doi.org/10.1038/s41375-024-02272-0
https://repository.publisso.de/resource/frl:6496193

Sensitive liquid biopsy monitoring correlates with outcome in the prospective international GPOH-DCOG high-risk neuroblastoma RT-qPCR validation study

Authors: Zogchel, L.M.J. van, Decarolis, B., Wezel, E.M. van, Zappeij-Kannegieter, L., Gelineau, N.U., Schumacher-Kuckelkorn, R., Simon, T., Berthold, F., Noesel, M.M. van, Fiocco, M., Schoot, C.E. van der, Hero, B., Stutterheim, J., Tytgat, G.A.M.

Contributors: Divisie Beeld & Oncologie, Onderzoek Beeld, Cancer

Source: J Exp Clin Cancer Res
Journal of Experimental & Clinical Cancer Research, Vol 43, Iss 1, Pp 1-16 (2024)

Subject Terms: Male, 0301 basic medicine, Cancer Research, Research, Liquid Biopsy, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, Infant, Prognosis, Real-Time Polymerase Chain Reaction, Female [MeSH], Humans [MeSH], Neuroblastoma/genetics [MeSH], Prospective Studies [MeSH], Neuroblastoma/mortality [MeSH], Neuroblastoma/pathology [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], Liquid Biopsy/methods [MeSH], Infant [MeSH], Male [MeSH], Biomarkers, Tumor/genetics [MeSH], Prognosis [MeSH], Child [MeSH], Child, Preschool [MeSH], Neuroblastoma, 03 medical and health sciences, 0302 clinical medicine, Oncology, Child, Preschool, Biomarkers, Tumor, Humans, Female, Prospective Studies, Child, RC254-282

File Description: application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/39722049
https://doaj.org/article/4aff26c2b0f04188895371500b0cde78
https://dspace.library.uu.nl/handle/1874/459899
https://pure.amsterdamumc.nl/en/publications/b42b7119-598d-4d90-831c-ec4cb70c09e8
https://doi.org/10.1186/s13046-024-03261-y
https://repository.publisso.de/resource/frl:6521099
https://hdl.handle.net/1887/4208865

Automated total nucleic acid extraction with magnetic beads for the detection of Plasmodium falciparum in large study cohorts

Authors: Inoue, Juliana, Huber, Nina, Fendel, Rolf, Held, Jana

Source: Malar J
Malaria Journal, Vol 23, Iss 1, Pp 1-8 (2024)

Subject Terms: Automation, Laboratory, 0301 basic medicine, Plasmodium, Nucleic acid extraction, RC955-962, Plasmodium falciparum, Methodology, Infectious and parasitic diseases, RC109-216, DNA, Protozoan, Real-Time Polymerase Chain Reaction, Cohort Studies, qPCR, Automation, 03 medical and health sciences, 0302 clinical medicine, Automation, Laboratory/methods [MeSH], RNA, Ribosomal, 18S/analysis [MeSH], Humans [MeSH], Plasmodium falciparum/genetics [MeSH], RNA, Protozoan/analysis [MeSH], Malaria, Falciparum/diagnosis [MeSH], RNA, Ribosomal, 18S/genetics [MeSH], DNA, Protozoan/isolation, RNA, Protozoan/isolation, Real-Time Polymerase Chain Reaction/methods [MeSH], Cohort Studies [MeSH], Plasmodium falciparum/isolation, DNA, Protozoan/genetics [MeSH], Malaria, Falciparum/parasitology [MeSH], Arctic medicine. Tropical medicine, RNA, Ribosomal, 18S, Humans, Malaria, Falciparum, RNA, Protozoan

Access URL: https://pubmed.ncbi.nlm.nih.gov/39716256
https://doaj.org/article/61929349a09841ac961876f0e5297693
https://repository.publisso.de/resource/frl:6517919

Analytical and clinical evaluation of a novel real-time PCR-based detection kit for Mpox virus

Authors: Bunse, Till, Ziel, Anne, Hagen, Philipp, Rigopoulos, George, Yasar, Umit, Inan, Hakan, Köse, Gurbet, Eigner, Ulrich, Kaiser, Rolf, Bardeck, Nils, Köffer, Jasmin, Kolb, Melissa, Ren, Xiaomei, Tan, Deyong, Dai, Lizhong, Protzer, Ulrike, Wettengel, Jochen M.

Source: Med Microbiol Immunol

Subject Terms: Parapoxvirus, 0301 basic medicine, 0303 health sciences, Real-Time Polymerase Chain Reaction, Sensitivity and Specificity, ddc, Disease Outbreaks, Mpox (monkeypox)/diagnosis [MeSH], Humans [MeSH], Parapoxvirus/genetics [MeSH], Reagent Kits, Diagnostic [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], Mpox (monkeypox)/virology [MeSH], Germany/epidemiology [MeSH], Disease Outbreaks [MeSH], Original Investigation, Mpox, Sensitivity and Specificity [MeSH], Limit of Detection [MeSH], Mpox detection assay, MPXV, Molecular Diagnostic Techniques/methods [MeSH], Parapoxvirus/isolation, Clinical diagnostics, Mpox, Monkeypox, 03 medical and health sciences, Molecular Diagnostic Techniques, Limit of Detection, Germany, Humans, Reagent Kits, Diagnostic

File Description: application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/39101951
https://repository.publisso.de/resource/frl:6500345
https://mediatum.ub.tum.de/doc/1770785/document.pdf

A real-time quantitative polymerase chain reaction for the specific detection of Hammondia hammondi and its differentiation from Toxoplasma gondii

Authors: Schares, Gereon R. M., Globokar Vrhovec, Majda, Tuschy, Mareen, Joeres, Maike, Bärwald, Andrea, Koudela, Bretislav, Dubey, Jitender, Maksimov, Pavlo, Conraths, Franz

Source: http://lobid.org/resources/99370673439106441#!, 14(1):78.

Subject Terms: Sarcocystidae/genetics [MeSH], Mice/parasitology [MeSH], Protozoa and protozoan diseases, TaqMan polymerase chain reaction, Sarcocystidae/isolation, Genes, Protozoan [MeSH], Oocyst, Animals [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], Diagnosis, Differential [MeSH], Pathology, Molecular/methods [MeSH], Quantitative polymerase chain reaction, Toxoplasmosis, Animal [MeSH], Feces/parasitology [MeSH], Toxoplasma/isolation, Research, Toxoplasma/genetics [MeSH], Coccidiosis/veterinary [MeSH], Cats/parasitology [MeSH], Faecal examination, Repetitive Sequences, Nucleic Acid [MeSH], Oocysts/genetics [MeSH], Oocysts/isolation

Relation: https://repository.publisso.de/resource/frl:6465576; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830817/

Availability: https://repository.publisso.de/resource/frl:6465576
https://doi.org/10.1186/s13071-020-04571-8
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830817/

A Real-time Quantitative Polymerase Chain Reaction for the Specific Detection of Hammondia Hammondi and Its Differentiation from Toxoplasma Gondii

Authors: Gereon Schares, Majda Globokar Vrhovec, Mareen Tuschy, Maike Joeres, Andrea Bärwald, Bretislav Koudela, Jitender P. Dubey, Pavlo Maksimov, Franz J. Conraths

Source: Parasit Vectors
Parasites & Vectors, Vol 14, Iss 1, Pp 1-11 (2021)
Parasites & Vectors

Subject Terms: Coccidiosis, Research, Genes, Protozoan, Oocysts, Infectious and parasitic diseases, RC109-216, Real-Time Polymerase Chain Reaction, 3. Good health, Diagnosis, Differential, Oocyst, Feces, Mice, Toxoplasmosis, Animal, Faecal examination, Quantitative polymerase chain reaction, TaqMan polymerase chain reaction, Sarcocystidae, Cats, Animals, Sarcocystidae/genetics [MeSH], Mice/parasitology [MeSH], Protozoa and protozoan diseases, Sarcocystidae/isolation, Genes, Protozoan [MeSH], Animals [MeSH], Real-Time Polymerase Chain Reaction/methods [MeSH], Diagnosis, Differential [MeSH], Pathology, Molecular/methods [MeSH], Toxoplasmosis, Animal [MeSH], Feces/parasitology [MeSH], Toxoplasma/isolation, Toxoplasma/genetics [MeSH], Coccidiosis/veterinary [MeSH], Cats/parasitology [MeSH], Repetitive Sequences, Nucleic Acid [MeSH], Oocysts/genetics [MeSH], Oocysts/isolation, Pathology, Molecular, Toxoplasma, Hammondia hammondi, Repetitive Sequences, Nucleic Acid

Access URL: https://parasitesandvectors.biomedcentral.com/track/pdf/10.1186/s13071-020-04571-8
https://pubmed.ncbi.nlm.nih.gov/33494796
https://doaj.org/article/f47a0d1531f24990bf46ba9c6ab4285c
https://www.ncbi.nlm.nih.gov/pubmed/33494796
https://pubmed.ncbi.nlm.nih.gov/33494796/
https://europepmc.org/article/PMC/PMC7830817
http://www.ncbi.nlm.nih.gov/pubmed/33494796
https://www.researchsquare.com/article/rs-117758/latest
https://www.openagrar.de/receive/openagrar_mods_00065420
https://repository.publisso.de/resource/frl:6465576