A genome catalog of the early-life human skin microbiome

Συγγραφείς: Zeyang Shen, Lukian Robert, Milan Stolpman, You Che, Katrina J. Allen, Richard Saffery, Audrey Walsh, Angela Young, Jana Eckert, Clay Deming, Qiong Chen, Sean Conlan, Karen Laky, Jenny Min Li, Lindsay Chatman, Sara Saheb Kashaf, NISC Comparative Sequencing Program, VITALITY team, Heidi H. Kong, Pamela A. Frischmeyer-Guerrerio, Kirsten P. Perrett, Julia A. Segre

Πηγή: Genome Biology, Vol 24, Iss 1, Pp 1-20 (2023)

Θεματικοί όροι: Biology (General), QH301-705.5, Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/1474-760X

Σύνδεσμος πρόσβασης: https://doaj.org/article/8bd92a52caf4410aa1e0f08be9028b56

Roving methyltransferases generate a mosaic epigenetic landscape and influence evolution in Bacteroides fragilis group

Συγγραφείς: Michael J. Tisza, Derek D. N. Smith, Andrew E. Clark, Jung-Ho Youn, NISC Comparative Sequencing Program, Pavel P. Khil, John P. Dekker

Πηγή: Nature Communications, Vol 14, Iss 1, Pp 1-15 (2023)

Θεματικοί όροι: Science

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/2041-1723

Σύνδεσμος πρόσβασης: https://doaj.org/article/42edacfce32b47419fe04b5eefbd110a

A mouse model of occult intestinal colonization demonstrating antibiotic-induced outgrowth of carbapenem-resistant Enterobacteriaceae

Συγγραφείς: Choon K. Sim, Sara Saheb Kashaf, Apollo Stacy, Diana M. Proctor, Alexandre Almeida, Nicolas Bouladoux, Mark Chen, NISC Comparative Sequencing Program, Robert D. Finn, Yasmine Belkaid, Sean Conlan, Julia A. Segre

Πηγή: Microbiome, Vol 10, Iss 1, Pp 1-16 (2022)

Θεματικοί όροι: Microbiome, Occult, Outgrowth, Antibiotic, Gut, Klebsiella, Microbial ecology, QR100-130

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/2049-2618

Σύνδεσμος πρόσβασης: https://doaj.org/article/8196fd2b58d84f188446150d8089e555

A novel de novo TP63 mutation in whole‐exome sequencing of a Syrian family with Oral cleft and ectrodactyly

Συγγραφείς: Claire L. Simpson, Danielle C. Kimble, Settara C. Chandrasekharappa, NISC Comparative Sequencing Program, Khalid Alqosayer, Emily Holzinger, Blake Carrington, John McElderry, Raman Sood, Ghiath Al‐Souqi, Hasan Albacha‐Hejazi, Joan E. Bailey‐Wilson

Πηγή: Molecular Genetics & Genomic Medicine, Vol 11, Iss 8, Pp n/a-n/a (2023)

Θεματικοί όροι: cleft lip, cleft palate, limb deformities, congenital, whole‐exome sequencing, Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/2324-9269

Σύνδεσμος πρόσβασης: https://doaj.org/article/ddbc8f557cdb439099ba7e3e4e0a688a

Primary oxidative phosphorylation defects lead to perturbations in the human B cell repertoire

Συγγραφείς: Eliza M. Gordon-Lipkin, Payal Banerjee, Jose Luis Marin Franco, Tatiana Tarasenko, Shannon Kruk, Elizabeth Thompson, Derek E. Gildea, Suiyuan Zhang, Tyra G. Wolfsberg, NISC Comparative Sequencing Program, Willy A. Flegel, Peter J. McGuire

Πηγή: Frontiers in Immunology, Vol 14 (2023)

Θεματικοί όροι: B cells, mitochondria, viral infection, VirScan, RNAseq analysis, Immunologic diseases. Allergy, RC581-607

Περιγραφή αρχείου: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2023.1142634/full; https://doaj.org/toc/1664-3224

Σύνδεσμος πρόσβασης: https://doaj.org/article/f3844f77f56c403f931ed7b8f9d60ad3

Low-level variant calling for non-matched samples using a position-based and nucleotide-specific approach

Συγγραφείς: Jeffrey N. Dudley, Celine S. Hong, Marwan A. Hawari, Jasmine Shwetar, Julie C. Sapp, Justin Lack, Henoke Shiferaw, NISC Comparative Sequencing Program, Jennifer J. Johnston, Leslie G. Biesecker

Πηγή: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-17 (2021)

Θεματικοί όροι: Mosaic variants, Prediction of mosaic variants, Somatic overgrowth disorder, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/1471-2105

Σύνδεσμος πρόσβασης: https://doaj.org/article/ef209cf7fefe41e7888cace1d84a2c3f

MEK inhibition remodels the active chromatin landscape and induces SOX10 genomic recruitment in BRAF(V600E) mutant melanoma cells

Συγγραφείς: Temesgen D. Fufa, Laura L. Baxter, Julia C. Wedel, Derek E. Gildea, NISC Comparative Sequencing Program, Stacie K. Loftus, William J. Pavan

Πηγή: Epigenetics & Chromatin, Vol 12, Iss 1, Pp 1-18 (2019)

Θεματικοί όροι: Pigmentation, Melanocyte, MAPK pathway, MEK inhibitor, Enhancers, SOX10, Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: http://link.springer.com/article/10.1186/s13072-019-0297-2; https://doaj.org/toc/1756-8935

Σύνδεσμος πρόσβασης: https://doaj.org/article/ce2c137f69cd42e7919eb66ea82b21b5

DNA methylation in mice is influenced by genetics as well as sex and life experience

Συγγραφείς: Sara A. Grimm, Takashi Shimbo, Motoki Takaku, James W. Thomas, Scott Auerbach, Brian D. Bennett, John R. Bucher, Adam B. Burkholder, Frank Day, Ying Du, Christopher G. Duncan, John E. French, Julie F. Foley, Jianying Li, B. Alex Merrick, Raymond R. Tice, Tianyuan Wang, Xiaojiang Xu, NISC Comparative Sequencing Program, Pierre R. Bushel, David C. Fargo, James C. Mullikin, Paul A. Wade

Πηγή: Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)

Θεματικοί όροι: Science

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/2041-1723

Σύνδεσμος πρόσβασης: https://doaj.org/article/f487b8a5e96d4b4596531537eeed2656

Admixture mapping identifies genetic regions associated with blood pressure phenotypes in African Americans.

Συγγραφείς: Zhi Liu, Daniel Shriner, Nancy F Hansen, Charles N Rotimi, James C Mullikin, NISC Comparative Sequencing Program

Πηγή: PLoS ONE, Vol 15, Iss 4, p e0232048 (2020)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/5148fe86c9f14437a04f753e6c72684b

A direct link between MITF, innate immunity, and hair graying.

Συγγραφείς: Melissa L Harris, Temesgen D Fufa, Joseph W Palmer, Sandeep S Joshi, Denise M Larson, Arturo Incao, Derek E Gildea, Niraj S Trivedi, Autumne N Lee, Chi-Ping Day, Helen T Michael, Thomas J Hornyak, Glenn Merlino, NISC Comparative Sequencing Program, William J Pavan

Πηγή: PLoS Biology, Vol 16, Iss 5, p e2003648 (2018)

Θεματικοί όροι: Biology (General), QH301-705.5

Περιγραφή αρχείου: electronic resource

Relation: https://doaj.org/toc/1544-9173; https://doaj.org/toc/1545-7885

Σύνδεσμος πρόσβασης: https://doaj.org/article/52a6c811de404a66a741337ea1540d80

Gene-Specific Substitution Profiles Describe the Types and Frequencies of Amino Acid Changes during Antibody Somatic Hypermutation

Συγγραφείς: Zizhang Sheng, Chaim A. Schramm, Rui Kong, NISC Comparative Sequencing Program, James C. Mullikin, John R. Mascola, Peter D. Kwong, Lawrence Shapiro

Πηγή: Frontiers in Immunology, Vol 8 (2017)

Θεματικοί όροι: antibodyomics, B cell ontogeny, broadly neutralizing antibody, mutation frequency, repertoire diversity, Immunologic diseases. Allergy, RC581-607

Περιγραφή αρχείου: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fimmu.2017.00537/full; https://doaj.org/toc/1664-3224

Σύνδεσμος πρόσβασης: https://doaj.org/article/9a95ccfe3d4b48bf82d151153d8360a0

Alternative Isoform Analysis of Ttc8 Expression in the Rat Pineal Gland Using a Multi-Platform Sequencing Approach Reveals Neural Regulation.

Συγγραφείς: Stephen W Hartley, James C Mullikin, David C Klein, Morgan Park, NISC Comparative Sequencing Program, Steven L Coon

Πηγή: PLoS ONE, Vol 11, Iss 9, p e0163590 (2016)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC5042479?pdf=render; https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/64ce8b535d2849c4aaddd1197f2e6551

Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8.

Συγγραφείς: Cinque Soto, Gilad Ofek, M Gordon Joyce, Baoshan Zhang, Krisha McKee, Nancy S Longo, Yongping Yang, Jinghe Huang, Robert Parks, Joshua Eudailey, Krissey E Lloyd, S Munir Alam, Barton F Haynes, NISC Comparative Sequencing Program, James C Mullikin, Mark Connors, John R Mascola, Lawrence Shapiro, Peter D Kwong

Πηγή: PLoS ONE, Vol 11, Iss 6, p e0157409 (2016)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0157409&type=printable; https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/60b7bd1713514882bff820a0623ed3bb

Neurotranscriptomics: The Effects of Neonatal Stimulus Deprivation on the Rat Pineal Transcriptome.

Συγγραφείς: Stephen W Hartley, Steven L Coon, Luis E Savastano, James C Mullikin, NISC Comparative Sequencing Program, Cong Fu, David C Klein

Πηγή: PLoS ONE, Vol 10, Iss 9, p e0137548 (2015)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC4569390?pdf=render; https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/1f9760fabe7d41b8853daefb4e5cea8e

Genetic modifiers of neurofibromatosis type 1-associated café-au-lait macule count identified using multi-platform analysis.

Συγγραφείς: Alexander Pemov, Heejong Sung, Paula L Hyland, Jennifer L Sloan, Sarah L Ruppert, Andrea M Baldwin, Joseph F Boland, Sara E Bass, Hyo Jung Lee, Kristine M Jones, Xijun Zhang, NISC Comparative Sequencing Program, James C Mullikin, Brigitte C Widemann, Alexander F Wilson, Douglas R Stewart

Πηγή: PLoS Genetics, Vol 10, Iss 10, p e1004575 (2014)

Θεματικοί όροι: Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC4199479?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Σύνδεσμος πρόσβασης: https://doaj.org/article/61d966c166c5493f8b7e3ef1f0ceb36e

BAC-based sequencing of behaviorally-relevant genes in the prairie vole.

Συγγραφείς: Lisa A McGraw, Jamie K Davis, Pamela J Thomas, NISC Comparative Sequencing Program, Larry J Young, James W Thomas

Πηγή: PLoS ONE, Vol 7, Iss 1, p e29345 (2012)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC3253076?pdf=render; https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/e7d210d583dc42eaaab4bc4877784ea2

Predisposition to cancer caused by genetic and functional defects of mammalian Atad5.

Συγγραφείς: Daphne W Bell, Nilabja Sikdar, Kyoo-Young Lee, Jessica C Price, Raghunath Chatterjee, Hee-Dong Park, Jennifer Fox, Masamichi Ishiai, Meghan L Rudd, Lana M Pollock, Sarah K Fogoros, Hassan Mohamed, Christin L Hanigan, NISC Comparative Sequencing Program, Suiyuan Zhang, Pedro Cruz, Gabriel Renaud, Nancy F Hansen, Praveen F Cherukuri, Bhavesh Borate, Kirk J McManus, Jan Stoepel, Payal Sipahimalani, Andrew K Godwin, Dennis C Sgroi, Maria J Merino, Gene Elliot, Abdel Elkahloun, Charles Vinson, Minoru Takata, James C Mullikin, Tyra G Wolfsberg, Philip Hieter, Dae-Sik Lim, Kyungjae Myung

Πηγή: PLoS Genetics, Vol 7, Iss 8, p e1002245 (2011)

Θεματικοί όροι: Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC3161924?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Σύνδεσμος πρόσβασης: https://doaj.org/article/f77e2c0ad98744ec84cad927ff742253

A rare myelin protein zero (MPZ) variant alters enhancer activity in vitro and in vivo.

Συγγραφείς: Anthony Antonellis, Megan Y Dennis, Grzegorz Burzynski, Jimmy Huynh, Valerie Maduro, Chani J Hodonsky, Mehrdad Khajavi, Kinga Szigeti, Sandeep Mukkamala, Seneca L Bessling, William J Pavan, Andrew S McCallion, James R Lupski, Eric D Green, NISC Comparative Sequencing Program

Πηγή: PLoS ONE, Vol 5, Iss 12, p e14346 (2010)

Θεματικοί όροι: Medicine, Science

Περιγραφή αρχείου: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0014346&type=printable; https://doaj.org/toc/1932-6203

Σύνδεσμος πρόσβασης: https://doaj.org/article/0911ef5b476045b4ab4871b2f20a088a

Balancing selection maintains a form of ERAP2 that undergoes nonsense-mediated decay and affects antigen presentation.

Συγγραφείς: Aida M Andrés, Megan Y Dennis, Warren W Kretzschmar, Jennifer L Cannons, Shih-Queen Lee-Lin, Belen Hurle, NISC Comparative Sequencing Program, Pamela L Schwartzberg, Scott H Williamson, Carlos D Bustamante, Rasmus Nielsen, Andrew G Clark, Eric D Green

Πηγή: PLoS Genetics, Vol 6, Iss 10, p e1001157 (2010)

Θεματικοί όροι: Genetics, QH426-470

Περιγραφή αρχείου: electronic resource

Relation: http://europepmc.org/articles/PMC2954825?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Σύνδεσμος πρόσβασης: https://doaj.org/article/dcc509bf91b64ef3b174824a0c207b08

Cell-type-specific eQTL of primary melanocytes facilitates identification of melanoma susceptibility genes

Συγγραφείς: Zhang, Tongwu, Author, Choi, Jiyeon, Author, Kovacs, Michael A., Author, Shi, Jianxin, Author, Xu, Mai, Author, Consortium, Melanoma Meta Analysis, Author, Goldstein, Alisa M., Author, Trower, Adam J., Author, Bishop, D. Timothy, Author, Iles, Mark M., Author, Duffy, David L., Author, MacGregor, Stuart, Author, Amundadottir, Laufey T., Author, Law, Matthew H., Author, Loftus, Stacie K., Author, Pavan, William J., Author, Brown, Kevin M., Author, NISC Comparative Sequencing Program, Author, Olsson, Håkan, Creator, Lund University, Faculty of Medicine, Department of Clinical Sciences, Lund, Section V, Surgery (Lund), Lund Melanoma Study Group, Lunds universitet, Medicinska fakulteten, Institutionen för kliniska vetenskaper, Lund, Sektion V, Kirurgi, Lund, Lunds Melanomstudiegrupp, Originator, Lund University, Faculty of Medicine, Department of Clinical Sciences, Lund, Section I, Tumor microenvironment, Lunds universitet, Medicinska fakulteten, Institutionen för kliniska vetenskaper, Lund, Sektion I, Tumörmikromiljö, Originator, Lund University, Profile areas and other strong research environments, Strategic research areas (SRA), EpiHealth: Epidemiology for Health, Lunds universitet, Profilområden och andra starka forskningsmiljöer, Strategiska forskningsområden (SFO), EpiHealth: Epidemiology for Health, Originator

Συνεισφορές: Zhang, Tongwu, Author, Choi, Jiyeon, Author, Kovacs, Michael A., Author, Shi, Jianxin, Author, Xu, Mai, Author, Consortium, Melanoma Meta Analysis, Author, Goldstein, Alisa M., Author, Trower, Adam J., Author, Bishop, D. Timothy, Author, Iles, Mark M., Author, Duffy, David L., Author, MacGregor, Stuart, Author, Amundadottir, Laufey T., Author, Law, Matthew H., Author, Loftus, Stacie K., Author, Pavan, William J., Author, Brown, Kevin M., Author, NISC Comparative Sequencing Program, Author, Olsson, Håkan, Creator, Lund University, Faculty of Medicine, Department of Clinical Sciences, Lund, Section V, Surgery (Lund), Lund Melanoma Study Group, Lunds universitet, Medicinska fakulteten, Institutionen för kliniska vetenskaper, Lund, Sektion V, Kirurgi, Lund, Lunds Melanomstudiegrupp, Originator, Lund University, Faculty of Medicine, Department of Clinical Sciences, Lund, Section I, Tumor microenvironment, Lunds universitet, Medicinska fakulteten, Institutionen för kliniska vetenskaper, Lund, Sektion I, Tumörmikromiljö, Originator, Lund University, Profile areas and other strong research environments, Strategic research areas (SRA), EpiHealth: Epidemiology for Health, Lunds universitet, Profilområden och andra starka forskningsmiljöer, Strategiska forskningsområden (SFO), EpiHealth: Epidemiology for Health, Originator

Πηγή: Genome Research. 28(11):1621-1635

Θεματικοί όροι: Medical and Health Sciences, Clinical Medicine, Cancer and Oncology, Medicin och hälsovetenskap, Klinisk medicin, Cancer och onkologi

Σύνδεσμος πρόσβασης: https://doi.org/10.1101/gr.233304.117