Rapid dissemination of host metabolism–manipulating genes via integrative and conjugative elements

Authors: Colombi, E, Bertels, F, Doulcier, G, McConnell, E, Pichugina, T, Sohn, KH, McCann, HC, Rainey, PB, Straub, C

Relation: Colombi, E., Bertels, F., Doulcier, G., McConnell, E., Pichugina, T., Sohn, K. H., McCann, H. C., Rainey, P. B. & Straub, C. (2024). Rapid dissemination of host metabolism–manipulating genes via integrative and conjugative elements. Proceedings of the National Academy of Sciences of the United States of America, 121 (11), https://doi.org/10.1073/pnas.2309263121.; https://hdl.handle.net/11343/353228

Availability: https://hdl.handle.net/11343/353228

Origin and Evolution of the Kiwifruit Canker Pandemic

Authors: McCann HC, Li L, Liu Y, Li D, Pan H, Zhong C, Rikkerink EHA, Templeton MD, Straub C, Colombi E, Rainey PB, Huang H

Source: Genome Biology and Evolution
Genome Biol Evol

Subject Terms: 0301 basic medicine, 0604 Genetics, China, 0303 health sciences, bacterial plant pathogen, Actinidia, plant-microbe interactions, pathogen evolution, Genetic Variation, Pseudomonas syringae, genomic epidemiology, 0601 Biochemistry and Cell Biology, 3. Good health, Phylogeography, 03 medical and health sciences, disease emergence, 0603 Evolutionary Biology, 13. Climate action, Fruit, Pandemics, Research Article, New Zealand, Plant Diseases

File Description: application/pdf

Access URL: https://academic.oup.com/gbe/article-pdf/9/4/932/13148941/evx055.pdf
https://pubmed.ncbi.nlm.nih.gov/28369338
https://hdl.handle.net/21.11116/0000-000D-0CA4-D
https://hdl.handle.net/11858/00-001M-0000-002E-2C43-D
https://hdl.handle.net/11858/00-001M-0000-002E-2C41-2

Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the P. syringae species complex

Authors: Jayaraman J, Jones WT, Harvey D, Hemara LM, McCann HC, Yoon M, Warring SL, Fineran PC, Mesarich CH, Templeton MD

File Description: application/pdf

Relation: https://mro.massey.ac.nz/handle/10179/73063; preprint

Availability: https://mro.massey.ac.nz/handle/10179/73063
https://doi.org/10.1101/2020.03.31.019141

Origin and evolution of the kiwifruit canker pandemic

Authors: McCann, HC, Li, L, Liu, Y, Li, D, Pan, H, Zhong, C, Rikkerink, EHA, Templeton, MD, Straub, C, Colombi, E, Rainey, PB, Huang, H

Index Terms: Journal Article

URL: https://hdl.handle.net/11343/317293

Interspecies Exchange of Mobile Genetic Elements During a Plant Disease Outbreak.

Authors: Evseeva D; Research Group for Plant Pathogen Evolution, Max Planck Institute for Biology, Tübingen, Germany., Pecrix Y; CIRAD UMR PVBMT, Saint-Pierre, La Réunion F-97410, France., Kucka M; Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany., Weiler C; Research Group for Plant Pathogen Evolution, Max Planck Institute for Biology, Tübingen, Germany., Franzl C; Research Group for Plant Pathogen Evolution, Max Planck Institute for Biology, Tübingen, Germany., Vlková-Žlebková M; Research Group for Plant Pathogen Evolution, Max Planck Institute for Biology, Tübingen, Germany., Colombi E; Macquarie University, Sydney, Australia., Chan YF; Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany., Poussier S; CIRAD UMR PVBMT, Saint-Pierre, La Réunion F-97410, France.; Université de la Réunion, La Réunion, France.; CIRAD UMR-PHIM, Montpellier, France., Wicker E; CIRAD UMR-PHIM, Montpellier, France., McCann HC; Research Group for Plant Pathogen Evolution, Max Planck Institute for Biology, Tübingen, Germany.

Source: Genome biology and evolution [Genome Biol Evol] 2026 Sep 02; Vol. 18 (9).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

MeSH Terms: Plant Diseases*/microbiology , Ralstonia*/genetics , Ralstonia*/pathogenicity , Ralstonia*/classification , Interspersed Repetitive Sequences*, Ralstonia solanacearum/genetics ; Phylogeny ; Disease Outbreaks ; Gene Transfer, Horizontal ; Evolution, Molecular

SCR Organism: Ralstonia pseudosolanacearum

Multiple effectors trigger non-host resistance in Solanum americanum against Pseudomonas syringae.

Authors: Kim J; Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea.; Global Plant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea., Vlková-Žlebková M; Max Planck Institute for Biology, Tübingen, 72076, Germany., McCann HC; Max Planck Institute for Biology, Tübingen, 72076, Germany., Sohn KH; Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea.; Global Plant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea.; Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea.; Plant Genomics and Breeding Institute, Seoul National University, Seoul, 08826, Republic of Korea.; Plant Health Center, Seoul National University, Seoul, 08826, Republic of Korea.

Source: The Plant journal : for cell and molecular biology [Plant J] 2025 Sep; Vol. 123 (6), pp. e70489.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Scientific Publishers and BIOS Scientific Publishers in association with the Society for Experimental Biology Country of Publication: England NLM ID: 9207397 Publication Model: Print Cited Medium: Internet ISSN: 1365-313X (Electronic) Linking ISSN: 09607412 NLM ISO Abbreviation: Plant J Subsets: MEDLINE

MeSH Terms: Disease Resistance*/genetics , Pseudomonas syringae*/genetics , Pseudomonas syringae*/immunology , Pseudomonas syringae*/pathogenicity , Solanum*/genetics , Solanum*/immunology , Solanum*/microbiology , Plant Diseases*/immunology , Plant Diseases*/microbiology, Type III Secretion Systems ; Virulence

Evolving Archetypes: Learning from Pathogen Emergence on a Nonmodel Host.

Authors: Vlková-Žlebková M; Max Planck Institute for Biology, Tübingen, Germany; email: honour.mccann@tuebingen.mpg.de., Yuen FW; Max Planck Institute for Biology, Tübingen, Germany; email: honour.mccann@tuebingen.mpg.de., McCann HC; Max Planck Institute for Biology, Tübingen, Germany; email: honour.mccann@tuebingen.mpg.de.

Source: Annual review of phytopathology [Annu Rev Phytopathol] 2024 Sep; Vol. 62 (1), pp. 49-68. Date of Electronic Publication: 2024 Aug 22.

Publication Type: Journal Article; Review

Journal Info: Publisher: Annual Reviews Country of Publication: United States NLM ID: 0372373 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1545-2107 (Electronic) Linking ISSN: 00664286 NLM ISO Abbreviation: Annu Rev Phytopathol Subsets: MEDLINE

MeSH Terms: Plant Diseases*/microbiology , Pseudomonas syringae*/genetics , Actinidia*/microbiology , Host-Pathogen Interactions*, Virulence ; Evolution, Molecular

Rapid dissemination of host metabolism-manipulating genes via integrative and conjugative elements.

Authors: Colombi E; School of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville, VIC 3010, Australia., Bertels F; Department of Microbial Population Biology, Max Planck Institute for Evolutionary Biology, Plön 24306, Germany., Doulcier G; Laboratoire Biophysique et Évolution, Institut Chemie Biologie Innovation, École Supérieure de Physique et de Chemie Industrielles de la Ville de Paris, Université Paris Science et Lettres, Centre National de al Reserche Scientifique, Paris 75005, France., McConnell E; Department of Microbial Population Biology, Max Planck Institute for Evolutionary Biology, Plön 24306, Germany., Pichugina T; Department of Microbial Population Biology, Max Planck Institute for Evolutionary Biology, Plön 24306, Germany., Sohn KH; Plant Immunity Research Center, Seoul National University, Seoul 08826, Republic of Korea.; Department of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea.; Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.; Plant Genomics and Breeding Institute, Seoul National University, Seoul 08826, Republic of Korea., Straub C; Health and Environment, Institute of Environmental Science and Research, Auckland 1025, New Zealand.; Division of Microbial Ecology, Center for Microbiology and Environmental Systems Science, University of Vienna, Vienna 1030, Austria., McCann HC; Plant Pathogen Evolution Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany., Rainey PB; Department of Microbial Population Biology, Max Planck Institute for Evolutionary Biology, Plön 24306, Germany.; Laboratoire Biophysique et Évolution, Institut Chemie Biologie Innovation, École Supérieure de Physique et de Chemie Industrielles de la Ville de Paris, Université Paris Science et Lettres, Centre National de al Reserche Scientifique, Paris 75005, France.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2024 Mar 12; Vol. 121 (11), pp. e2309263121. Date of Electronic Publication: 2024 Mar 08.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

MeSH Terms: Gene Transfer, Horizontal*/genetics , Conjugation, Genetic*, DNA Transposable Elements/genetics ; Phylogeny ; Biological Evolution

Seed size effects on plant establishment under low atmospheric CO2, with implications for seed size evolution.

Authors: McCann HC; Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, M5S 3B2, Canada.; Max Planck Institute for Biology, Tübingen, Germany., Sage RF; Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, M5S 3B2, Canada.

Source: Annals of botany [Ann Bot] 2022 Dec 16; Vol. 130 (6), pp. 825-834.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0372347 Publication Model: Print Cited Medium: Internet ISSN: 1095-8290 (Electronic) Linking ISSN: 03057364 NLM ISO Abbreviation: Ann Bot Subsets: MEDLINE

MeSH Terms: Seedlings*/physiology , Carbon Dioxide*, Photosynthesis/physiology ; Humans ; Seeds ; Plants ; Germination

Ralstonia solanacearum Type III Effector RipJ Triggers Bacterial Wilt Resistance in Solanum pimpinellifolium.

Authors: Pandey A; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Moon H; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Choi S; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Yoon H; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Prokchorchik M; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.; Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany., Jayaraman J; New Zealand Institute for Plant & Food Research Limited (PFR), Mt Albert Auckland 1025, New Zealand., Sujeevan R; Division of Biological Sciences and Research Institute for Basic Science, Wonkwang University, Iksan 54538, Republic of Korea., Kang YM; Division of Horticulture Industry, Wonkwang University, Iksan 554438, Republic of Korea., McCann HC; Institute of Advanced Studies, Massey University, Auckland 0745, New Zealand.; Max Planck Institute for Developmental Biology, Tübingen, Germany., Segonzac C; Department of Plant Science, Plant Genome and Breeding Institute, Agricultural Life Science Research Institute, Seoul National University, 08826, Seoul, Republic of Korea.; Plant Immunity Research Center, Seoul National University, 08826, Seoul, Republic of Korea.; Department of Agriculture, Forestry and Bioresources, Seoul National University, 08826, Seoul, Republic of Korea., Kim CM; Division of Horticulture Industry, Wonkwang University, Iksan 554438, Republic of Korea., Park SJ; Division of Biological Sciences and Research Institute for Basic Science, Wonkwang University, Iksan 54538, Republic of Korea., Sohn KH; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.; School of Interdisciplinary Biosciences and Bioengineering, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.

Source: Molecular plant-microbe interactions : MPMI [Mol Plant Microbe Interact] 2021 Aug; Vol. 34 (8), pp. 962-972. Date of Electronic Publication: 2021 Sep 09.

Publication Type: Journal Article

Journal Info: Publisher: APS Press Country of Publication: United States NLM ID: 9107902 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0894-0282 (Print) Linking ISSN: 08940282 NLM ISO Abbreviation: Mol Plant Microbe Interact Subsets: MEDLINE

MeSH Terms: Ralstonia solanacearum* , Solanum*, Bacterial Proteins/genetics ; Disease Resistance ; Plant Diseases

Identification of RipAZ1 as an avirulence determinant of Ralstonia solanacearum in Solanum americanum.

Authors: Moon H; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Pandey A; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Yoon H; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Choi S; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Jeon H; Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, Republic of Korea.; Plant Immunity Research Center, Seoul National University, Seoul, Republic of Korea., Prokchorchik M; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Jung G; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Witek K; The Sainsbury Laboratory, University of East Anglia, Norwich, UK., Valls M; Department of Genetics, University of Barcelona, Barcelona, Spain.; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Spain., McCann HC; New Zealand Institute of Advanced Studies, Massey University, Auckland, New Zealand.; Max Planck Institute for Developmental Biology, Tübingen, Germany., Kim MS; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.; Division of Integrative Biosciences and Biotechnology, Pohang University of Science and Technology, Republic of Korea., Jones JDG; The Sainsbury Laboratory, University of East Anglia, Norwich, UK., Segonzac C; Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, Republic of Korea.; Plant Immunity Research Center, Seoul National University, Seoul, Republic of Korea.; Department of Plant Science, Plant Genomics and Breeding Institute, Agricultural Life Science Research Institute, Seoul National University, Seoul, Republic of Korea., Sohn KH; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.; School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, Pohang, Republic of Korea.

Source: Molecular plant pathology [Mol Plant Pathol] 2021 Mar; Vol. 22 (3), pp. 317-333. Date of Electronic Publication: 2021 Jan 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Science in collaboration with the British Society of Plant Pathology Country of Publication: England NLM ID: 100954969 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1364-3703 (Electronic) Linking ISSN: 13643703 NLM ISO Abbreviation: Mol Plant Pathol Subsets: MEDLINE

MeSH Terms: Bacterial Proteins/*metabolism , Disease Resistance/*genetics , Plant Diseases/*microbiology , Ralstonia solanacearum/*genetics , Solanum/*microbiology, Bacterial Proteins/genetics ; Plant Diseases/immunology ; Ralstonia solanacearum/pathogenicity ; Plant Immunity ; Plant Leaves ; Virulence

Population Genomics of Bacterial Plant Pathogens.

Authors: Straub C; Institute of Environmental Science and Research, Health and Environment, Auckland, New Zealand.; Genomics Aotearoa, New Zealand., Colombi E; Curtin Health Innovation Research Institute (CHIRI), Curtin University, Perth, Western Australia, Australia.; School of Pharmacy and Biomedical Sciences, Curtin University, Perth, Western Australia, Australia., McCann HC; New Zealand Institute for Advanced Study, Massey University, Albany, New Zealand.; Max Planck Institute for Developmental Biology, Tübingen, Germany.

Source: Phytopathology [Phytopathology] 2021 Jan; Vol. 111 (1), pp. 23-31. Date of Electronic Publication: 2020 Dec 11.

Publication Type: Journal Article; Review

Journal Info: Publisher: American Phytopathological Society] Country of Publication: United States NLM ID: 9427222 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0031-949X (Print) Linking ISSN: 0031949X NLM ISO Abbreviation: Phytopathology Subsets: MEDLINE

MeSH Terms: Metagenomics* , Plant Diseases*, Bacteria ; Crops, Agricultural ; Virulence

Host adaptation and microbial competition drive Ralstonia solanacearum phylotype I evolution in the Republic of Korea.

Authors: Prokchorchik M; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Pandey A; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Moon H; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Kim W; Department of Plant Science, Plant Genome and Breeding Institute, Agricultural Life Science Research Institute, Seoul National University, Seoul 08826, Republic of Korea.; Plant Immunity Research Center, Seoul National University, Seoul 08826, Republic of Korea., Jeon H; Plant Immunity Research Center, Seoul National University, Seoul 08826, Republic of Korea.; Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Republic of Korea., Jung G; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., Jayaraman J; The New Zealand Institute for Plant and Food Research, Auckland, New Zealand., Poole S; Department of Molecular, Cellular and Developmental Biology, University of California Santa Barbara, Santa Barbara, USA., Segonzac C; Department of Plant Science, Plant Genome and Breeding Institute, Agricultural Life Science Research Institute, Seoul National University, Seoul 08826, Republic of Korea.; Plant Immunity Research Center, Seoul National University, Seoul 08826, Republic of Korea.; Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Republic of Korea., Sohn KH; Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.; School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, Pohang 37673, Republic of Korea., McCann HC; New Zealand Institute for Advanced Study, Massey University Albany, New Zealand.; Max Planck Institute for Developmental Biology, Tübingen, Germany.

Source: Microbial genomics [Microb Genom] 2020 Nov; Vol. 6 (11).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE

MeSH Terms: Capsicum/*microbiology , Host Adaptation/*genetics , Solanum lycopersicum/*microbiology , Ralstonia/*genetics , Ralstonia solanacearum/*genetics, Disease Resistance/genetics ; Genetic Variation/genetics ; Genome, Bacterial/genetics ; Plant Diseases/microbiology ; Ralstonia/isolation & purification ; Ralstonia solanacearum/isolation & purification ; Virulence/genetics ; Phylogeny ; Republic of Korea

SCR Organism: Ralstonia pseudosolanacearum

TGFam-Finder: a novel solution for target-gene family annotation in plants.

Authors: Kim S; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea.; Department of Environmental Horticulture, University of Seoul, Seoul, 02504, Korea., Cheong K; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea., Park J; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea., Kim MS; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea.; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea., Kim J; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea., Seo MK; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea., Chae GY; Department of Environmental Horticulture, University of Seoul, Seoul, 02504, Korea., Jang MJ; Department of Environmental Horticulture, University of Seoul, Seoul, 02504, Korea., Mang H; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea., Kwon SH; Department of Pharmacology, Seoul National University College of Medicine, Seoul, 03080, Korea., Kim YM; Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Korea., Koo N; Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Korea., Min CW; Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang, 627-706, Korea., Kim KS; Department of Biomedical Science, College of Life Science, CHA University, Seongnam, 13488, Korea., Oh N; Department of Biomedical Science, College of Life Science, CHA University, Seongnam, 13488, Korea., Kim KT; Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Korea., Jeon J; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea., Kim H; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea., Lee YY; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Korea., Sohn KH; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Korea.; School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, Pohang, Gyeongbuk, 37673, Korea., McCann HC; New Zealand Institute for Advanced Study, Massey University Auckland, Auckland, 0632, New Zealand., Ye SK; Department of Pharmacology, Seoul National University College of Medicine, Seoul, 03080, Korea., Kim ST; Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang, 627-706, Korea., Park KS; Department of Biomedical Science, College of Life Science, CHA University, Seongnam, 13488, Korea., Lee YH; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea.; Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Korea., Choi D; Department of Plant Science, Plant Immunity Research Center, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Korea.; Interdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, 08826, Korea.

Source: The New phytologist [New Phytol] 2020 Sep; Vol. 227 (5), pp. 1568-1581. Date of Electronic Publication: 2020 Jun 05.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley on behalf of New Phytologist Trust Country of Publication: England NLM ID: 9882884 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-8137 (Electronic) Linking ISSN: 0028646X NLM ISO Abbreviation: New Phytol Subsets: MEDLINE

MeSH Terms: Genome, Plant*/genetics , Plants*/genetics, Molecular Sequence Annotation

Skirmish or war: the emergence of agricultural plant pathogens.

Authors: McCann HC; New Zealand Institute for Advanced Study, Massey University, Albany, New Zealand; Max Planck Institute for Developmental Biology, Tübingen, Germany. Electronic address: h.mccann@massey.ac.nz.

Source: Current opinion in plant biology [Curr Opin Plant Biol] 2020 Aug; Vol. 56, pp. 147-152. Date of Electronic Publication: 2020 Jul 23.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Review

Journal Info: Publisher: Current Biology Ltd Country of Publication: England NLM ID: 100883395 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0356 (Electronic) Linking ISSN: 13695266 NLM ISO Abbreviation: Curr Opin Plant Biol Subsets: MEDLINE

MeSH Terms: Agriculture* , Disease Reservoirs*, Animals ; Biological Evolution ; Plant Diseases

Using Bioinformatics and Molecular Biology to Streamline Construction of Effector Libraries for Phytopathogenic Pseudomonas syringae Strains.

Authors: Jayaraman J; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.; The New Zealand Institute for Plant & Food Research Ltd, Auckland, New Zealand., Halane MK; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., Choi S; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea., McCann HC; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Sohn KH; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea. khsohn@postech.ac.kr.; School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, Pohang, Republic of Korea. khsohn@postech.ac.kr.

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2019; Vol. 1991, pp. 1-12.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Host-Pathogen Interactions*, Arabidopsis/*microbiology , Bacterial Proteins/*metabolism , Computational Biology/*methods , Plant Diseases/*microbiology , Pseudomonas syringae/*pathogenicity, Arabidopsis/metabolism ; Bacterial Secretion Systems/metabolism ; Virulence Factors/metabolism ; Gene Library ; Molecular Biology ; Virulence

The ecological genetics of Pseudomonas syringae from kiwifruit leaves.

Authors: Straub C; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Colombi E; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Li L; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, People's Republic of China., Huang H; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, People's Republic of China.; Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, People's Republic of China., Templeton MD; Plant and Food Research, Auckland, New Zealand., McCann HC; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Rainey PB; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand.; Max Planck Institute for Evolutionary Biology, Department of Microbial Population Biology, Plön, Germany.; École Supérieure de Physique et de Chimie Industrielles de la Ville de Paris (ESPCI Paris Tech), Laboratoire de Génétique de l'Evolution, Paris, France.

Source: Environmental microbiology [Environ Microbiol] 2018 Jun; Vol. 20 (6), pp. 2066-2084. Date of Electronic Publication: 2018 Mar 26.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

MeSH Terms: Actinidia/*microbiology , Plant Diseases/*microbiology , Plant Leaves/*microbiology , Pseudomonas syringae/*genetics, Movement ; Virulence

Rapid radiations of both kiwifruit hybrid lineages and their parents shed light on a two-layer mode of species diversification.

Authors: Liu Y; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Li D; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Zhang Q; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Song C; Wuhan Benagen Tech Solutions Company Limited, Wuhan, Hubei, 430070, China., Zhong C; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Zhang X; Wuhan Benagen Tech Solutions Company Limited, Wuhan, Hubei, 430070, China., Wang Y; Wuhan Benagen Tech Solutions Company Limited, Wuhan, Hubei, 430070, China., Yao X; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Wang Z; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Zeng S; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Wang Y; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Guo Y; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Wang S; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Li X; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Li L; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Liu C; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., McCann HC; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China.; New Zealand Institute for Advanced Study, Massey University, Auckland, 0745, New Zealand., He W; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China., Niu Y; Wuhan Benagen Tech Solutions Company Limited, Wuhan, Hubei, 430070, China., Chen M; Wuhan Benagen Tech Solutions Company Limited, Wuhan, Hubei, 430070, China., Du L; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Gong J; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China., Datson PM; The New Zealand Institute for Plant and Food Research Limited, Mt Albert Research Centre, Auckland, 1142, New Zealand., Hilario E; The New Zealand Institute for Plant and Food Research Limited, Mt Albert Research Centre, Auckland, 1142, New Zealand., Huang H; Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, The Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China.; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, Hubei, 430074, China.

Source: The New phytologist [New Phytol] 2017 Jul; Vol. 215 (2), pp. 877-890. Date of Electronic Publication: 2017 May 25.

Publication Type: Journal Article

Journal Info: Publisher: Wiley on behalf of New Phytologist Trust Country of Publication: England NLM ID: 9882884 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-8137 (Electronic) Linking ISSN: 0028646X NLM ISO Abbreviation: New Phytol Subsets: MEDLINE

MeSH Terms: Chimera* , Phylogeny*, Actinidia/*genetics, Gene Flow ; Genetic Variation ; Genome, Plant ; Hybridization, Genetic

Evolution of copper resistance in the kiwifruit pathogen Pseudomonas syringae pv. actinidiae through acquisition of integrative conjugative elements and plasmids.

Authors: Colombi E; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Straub C; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand., Künzel S; Max Planck Institute for Evolutionary Biology, Plön, Germany., Templeton MD; Plant and Food Research, Auckland, New Zealand.; School of Biological Sciences, University of Auckland, Auckland, New Zealand., McCann HC; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand.; South China Botanical Institute, Chinese Academy of Sciences, Guangzhou, China., Rainey PB; New Zealand Institute for Advanced Study, Massey University, Auckland, New Zealand.; Max Planck Institute for Evolutionary Biology, Plön, Germany.; Ecole Supérieure de Physique et de Chimie Industrielles de la Ville de Paris (ESPCI Paris-Tech), PSL Research University, Paris, France.

Source: Environmental microbiology [Environ Microbiol] 2017 Feb; Vol. 19 (2), pp. 819-832. Date of Electronic Publication: 2017 Feb 01.

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

MeSH Terms: Conjugation, Genetic* , Drug Resistance, Bacterial*, Actinidia/*microbiology , Copper/*pharmacology , Plant Diseases/*microbiology , Plasmids/*genetics , Pseudomonas syringae/*drug effects , Pseudomonas syringae/*genetics, Fruit/microbiology ; Plasmids/metabolism ; Pseudomonas syringae/physiology ; Biological Evolution ; Host Specificity

Evolution, genomics and epidemiology of Pseudomonas syringae: Challenges in Bacterial Molecular Plant Pathology.

Authors: Baltrus DA; School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA., McCann HC; New Zealand Institute for Advanced Study, Massey University, Auckland 0632, New Zealand., Guttman DS; Department of Cell and Systems Biology, University of Toronto, Toronto, ON M5S 3B2, Canada.; Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, ON M5S 3B2, Canada.

Source: Molecular plant pathology [Mol Plant Pathol] 2017 Jan; Vol. 18 (1), pp. 152-168. Date of Electronic Publication: 2016 Nov 25.

Publication Type: Journal Article; Review

Journal Info: Publisher: Blackwell Science in collaboration with the British Society of Plant Pathology Country of Publication: England NLM ID: 100954969 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1364-3703 (Electronic) Linking ISSN: 13643703 NLM ISO Abbreviation: Mol Plant Pathol Subsets: MEDLINE

MeSH Terms: Biological Evolution* , Genomics* , Plant Pathology*, Plant Diseases/*microbiology , Plant Diseases/*statistics & numerical data , Pseudomonas syringae/*genetics, Plant Diseases/genetics ; Genetic Variation