Quality Metrics and Reordering Strategies for Revealing Patterns in BioFabric Visualizations

Authors: Fuchs, J., Frings, A., Heinle, M., Keim, D.A., Di Bartolomeo, S.

Source: IEEE Transactions on Visualization and Computer Graphics IEEE Trans. Visual. Comput. Graphics Visualization and Computer Graphics, IEEE Transactions on. 31(1):1039-1049 Jan, 2025

The Multi-Dimensional Landscape of Graph Drawing Metrics

Authors: Mooney, Gavin J., Purchase, Helen C., Wybrow, Michael, Kobourov, Stephen G.

Source: 2024 IEEE 17th Pacific Visualization Conference (PacificVis) PACIFICVIS Pacific Visualization Conference (PacificVis), 2024 IEEE 17th. :122-131 Apr, 2024

Relation: 2024 IEEE 17th Pacific Visualization Conference (PacificVis)

Structural and Algorithmic Limitations in LLM-Driven BPMN Generation: A Rapid Review of Empirical Evidence

Authors: Gomes, Maiquel^Aff12, Vasconcelos, Gyslla^Aff12, Viterbo, Jose^Aff12

Contributors: Kacprzyk, Janusz, Series Editor^Aff1, Gomide, Fernando, Advisory Editor^Aff2, Kaynak, Okyay, Advisory Editor^Aff3, Liu, Derong, Advisory Editor^Aff4, Pedrycz, Witold, Advisory Editor^Aff5, Polycarpou, Marios M., Advisory Editor^Aff6, Rudas, Imre J., Advisory Editor^Aff7, Wang, Jun, Advisory Editor^Aff8, Rocha, Alvaro, editor^Aff9, Adeli, Hojjat, editor^Aff10, Moreira, Fernando, editor^Aff11

Source: Recent Trends and Challenges in Information Systems and Technologies : WorldCIST 2026, Volume 4. 2094:109-119

A Novel Tool for Graph Theory Education: Interactive Exploration of the Hamiltonian Problem with Z3 and the Keçeci Layout

Authors: Keçeci, Mehmet

Subject Terms: Graph Visualization, Computational Logic, Automated Reasoning, Data Visualization, Hamiltonian Cycle, Z3 Theorem Prover, Z3, Keçeci Layout, CSP, Graph Layout Algorithms, Declarative Programming, Graph Theory, Symbolic Computation, Constraint Satisfaction Problem, NP-Complete Problems, SMT Solver

Interactive Exploration of the Hamiltonian Problem with Z3 and the Keçeci Layout

Authors: Mehmet Keçeci

Subject Terms: Computer graphics, Graph Visualization, Hamiltonian Cycle, Z3 Theorem Prover, SMT Solver, Constraint Satisfaction Problem, CSP, Graph Theory, Graph Layout Algorithms, Keçeci Layout, Declarative Programming, Symbolic Computation, NP-Complete Problems, Computational Logic, Automated Reasoning, Data Visualization

Relation: https://figshare.com/articles/journal_contribution/Interactive_Exploration_of_the_Hamiltonian_Problem_with_Z3_and_the_Ke_eci_Layout/29959778

Availability: https://doi.org/10.6084/m9.figshare.29959778.v2
https://figshare.com/articles/journal_contribution/Interactive_Exploration_of_the_Hamiltonian_Problem_with_Z3_and_the_Ke_eci_Layout/29959778

An interactive visualization tool and data model for experimental design in systems biology

Authors: Kapoor, Shray, Quo, Chang Feng, Merrill, Alfred H., Wang, May D.

Source: 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE. :2423-2426 Aug, 2008

Relation: 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society

Shape-Based Quality Metrics for Large Graph Visualization: Shape-based quality metrics for large graph visualization

Authors: Peter Eades, Seok-Hee Hong 0001, Karsten Klein 0001, An Nguyen 0001

Source: Lecture Notes in Computer Science ISBN: 9783319272603

Subject Terms: Graph theory, Graph algorithms (graph-theoretic aspects), Applications of graph theory, 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology, scalability of graph layout algorithms

File Description: application/xml

Graph Layout with Versatile Boundary Constraints: Graph layout with versatile boundary constraints

Authors: Zhang, Yani, Pang, Alex

Source: Journal of Graph Algorithms and Applications. 20:435-459

Subject Terms: Graph algorithms (graph-theoretic aspects), Graph representations (geometric and intersection representations, etc.), 0202 electrical engineering, electronic engineering, information engineering, 0102 computer and information sciences, 02 engineering and technology, 01 natural sciences, force-directed graph layout algorithms

File Description: application/xml

Access URL: https://zbmath.org/6626899
https://doi.org/10.7155/jgaa.00401

Graph Layout Aesthetics in UML Diagrams: User Preferences: Graph layout aesthetics in UML diagrams: User preferences

Authors: Helen C. Purchase, Jo-Anne Allder, David A. Carrington

Contributors: R. Tomassia, I. Tollis

Source: Graph Algorithms and Applications 3 ISBN: 9789812389398

Subject Terms: 280302 Software Engineering, automatic graph layout algorithms, C1, 700199 Computer software and services not elsewhere classified, Graph theory (including graph drawing) in computer science, Applications of graph theory, 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology

File Description: application/xml

Access URL: http://www.emis.de/journals/JGAA/accepted/02/PurchaseAllderCarrington02.6.3.pdf
https://zbmath.org/1932977
https://doi.org/10.7155/jgaa.00054
https://espace.library.uq.edu.au/view/UQ:62301
https://api.library.uq.edu.au/view/UQ:62301

Star-like auto-configurable layouts of variable radius for visualizing and exploring RDF/S ontologies

Authors: Zampetakis, Stamatis ^{a, b}, Tzitzikas, Yannis ^{a, b, ⁎}, Leonidis, Asterios ^{a, b}, Kotzinos, Dimitris ^{a, c}

Source: In Journal of Visual Languages and Computing June 2012 23(3):137-153

Preserving the Mental Map when Visualizing Dynamic Graphs : An Approach for Intermediate Representations in the C2 Java Compiler

Bevarande av den mentala kartan vid visualisering av dynamiska grafer : Ett tillvägagångssätt för mellanrepresentationer i C2 Java-kompilatorn

Authors: Yin, Emmy

Subject Terms: Dynamic Graphs, Graph Layout Algorithms, Visualization, Hierarchical Graph Layouts, Dynamiska grafer, grafritningsalgoritmer, visualisering, hierarkiska grafritningar, Computer and Information Sciences, Data- och informationsvetenskap

File Description: application/pdf

Relation: TRITA-EECS-EX ; 2023:343

Availability: http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-329352

Preserving the Mental Map when Visualizing Dynamic Graphs : An Approach for Intermediate Representations in the C2 Java Compiler ; Bevarande av den mentala kartan vid visualisering av dynamiska grafer : Ett tillvägagångssätt för mellanrepresentationer i C2 Java-kompilatorn

Authors: Yin, Emmy

Subject Terms: Dynamic Graphs, Graph Layout Algorithms, Visualization, Hierarchical Graph Layouts, Dynamiska grafer, grafritningsalgoritmer, visualisering, hierarkiska grafritningar, Computer and Information Sciences, Data- och informationsvetenskap

File Description: application/pdf

Relation: TRITA-EECS-EX; 2023:343

Availability: http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-329352

A Compound Graph Layout Algorithm for Biological Pathways

Authors: Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir

Source: Lecture Notes in Computer Science ISBN: 9783540245285
GD'04: Proceedings of the 12th international conference on Graph Drawing

Subject Terms: Graph theory, 0301 basic medicine, Arbitrary nesting, 03 medical and health sciences, Compartimental constraints, Drawing (graphics), Compound graph layout algorithms, 0206 medical engineering, Biological pathways, 02 engineering and technology, Computer science, Constraint theory, Algorithms

File Description: application/pdf

Access URL: https://link.springer.com/content/pdf/10.1007%2F978-3-540-31843-9_45.pdf
http://hdl.handle.net/11693/27422

Effective information visualisation: a study of graph Drawing Aesthetics . . .

Authors: H.C. Purchase

Contributors: The Pennsylvania State University CiteSeerX Archives

Source: http://www.dcs.gla.ac.uk/publications/PAPERS/6464/iwc00.pdf.

Subject Terms: Graph drawings, Graph layout aesthetics, Graph layout algorithms, User experimentation, Relational

File Description: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.505.2288; http://www.dcs.gla.ac.uk/publications/PAPERS/6464/iwc00.pdf

Availability: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.505.2288
http://www.dcs.gla.ac.uk/publications/PAPERS/6464/iwc00.pdf

Using Constraints To Achieve Stability In Automatic Graph Layout Algorithms

Authors: Karl-Friedrich Böhringer, Frances Newbery Paulisch

Contributors: The Pennsylvania State University CiteSeerX Archives

Source: http://www.ee.washington.edu/faculty/karl/Publications/PS/SIGCHI90.ps.gz.

Subject Terms: Graphical user interfaces, graph layout algorithms, layout constraints

File Description: application/postscript

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.56.5337; http://www.ee.washington.edu/faculty/karl/Publications/PS/SIGCHI90.ps.gz

Availability: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.56.5337
http://www.ee.washington.edu/faculty/karl/Publications/PS/SIGCHI90.ps.gz

Effective information visualisation: a study of graph drawing aesthetics and algorithms

Authors: Purchase, H.C ^*

Source: In Interacting with Computers 2000 13(2):147-162

End User Controlled Visualization of Large Graphs

Authors: Tyson R. Henry, Scott E. Hudson

Contributors: The Pennsylvania State University CiteSeerX Archives

Source: ftp://ftp.cs.unm.edu/pub/tyson/layout.ps

Subject Terms: Categories and Subject Descriptors, D.1.7 [Programming Techniques, Visual Programming, D.2.2 [Software Engineering, Tools and Techniques---user interfaces, D.2.6 [Software Engineering, Programming Environments---interactive, H.2.3 [Models and Principles, User/Machine Systems---Human factors, I.3.3 [Computer Graphics, Picture /Image Generation---Display algorithms, I.3.6 [Computer Graphics, Methodology and Techniques---Interaction techniques General Terms, User Interfaces, Interactive Systems, Computer Graphics Additional Key Words and Phrases, graph layout algorithms, interactive graph layout, data visualization

File Description: application/postscript

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.53.3520

Availability: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.53.3520