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    Conference
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    Conference

    Contributors: Обходский, Артем Викторович

    Relation: Ресурсоэффективные системы в управлении и контроле: взгляд в будущее : сборник научных трудов VI Международной конференции школьников, студентов, аспирантов, молодых ученых, 9 -14 октября 2017 г., г. Томск. — Томск, 2017.; http://earchive.tpu.ru/handle/11683/44710

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    Academic Journal

    File Description: application/pdf

    Relation: Качанов П. А. Методы реализации проективных преобразований в компьютерной графике / П. А. Качанов, А. А. Зуев, К. Н. Яценко // Вісник Нац. техн. ун-ту "ХПІ" : зб. наук. пр. Темат. вип. : Автоматика та приладобудування = Bulletin of National Technical University "KhPI" : coll. of sci. papers. Ser. : Automatics and instrument making. – Харків : НТУ "ХПІ", 2016. – № 15 (1187). – С. 22-25.; http://repository.kpi.kharkov.ua/handle/KhPI-Press/21749

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    Academic Journal

    Source: Vavilov Journal of Genetics and Breeding; Том 19, № 6 (2015); 661-667 ; Вавиловский журнал генетики и селекции; Том 19, № 6 (2015); 661-667 ; 2500-3259

    File Description: application/pdf

    Relation: https://vavilov.elpub.ru/jour/article/view/482/810; Baker Z.K., Prasanna V.K. An architecture for efficient hardware data mining using reconfigurable computing systems. 14th Annual IEEE Symp. on Field-Programmable Custom Computing Machines, 2006.; Benson D.A., Cavanaugh M., Clark K., Karsch-Mizrachi I., Lipman D. J., Ostell J., Sayers E.W. GenBank. Nucl. Acids Res. 2013;41(Database issue):D36-42.; Elnitski L., Hardison R.C., Yang S., Kolbe D., Eswara P., O’Connor M. J., Schwartz S., Miller W. Chiaromonte F. Distinguishing regulatory DNA from neutral sites. Genome Res. 2003;13(1):64-72.; Fomin E.S., Alemasov N.A. Implementation of a non-bonded interaction calculation algorithm for the cell architecture. Lect. Notes Comput. Sci. 2009;5698:399-405.; Grundy W.N., Bailey T.L., Elkan C.P. ParaMEME: a parallel implementation and a web interface for a DNA and protein motif discovery tool. CABIOS. 1996;12:303-310.; Hertz G.Z, Stormo G.D. Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics. 1999;15:563-577.; Kolchanov N.A., Ignatieva E.V., Ananko E.A., Podkolodnaya O.A., Stepanenko I.L., Merkulova T.I., Pozdnyakov M.A., Podkolodny N. L., Naumochkin A.N., Romashchenko A.G. Transcription Regulatory Regions Database (TRRD): its status in 2002. Nucl. Acids Res. 2002;30:312-317.; Lawrence C.E., Altschul S.F., Boguski M.S., Liu J.S., Neuwald A.F., Wootton J.C. Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science. 1993;262:208-214.; Manavski S.A., Valle G. CUDA compatible GPU cards as efficient hardware accelerators for Smith–Waterman sequence alignment. BMC Bioinformatics. 2008;26;9 Suppl 2:S10.; Marsan L., Sagot M.F. Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. J. Comput. Biol. 2000;7:345-362.; Matys V., Kel-Margoulis O.V., Fricke E., Liebich I., Land S., Barre-Dirrie A., Reuter I., Chekmenev D., Krull M., Hornischer K., Voss N., Stegmaier P., Lewicki-Potapov B., Saxel H., Kel A.E., Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucl. Acids Res. 2006;34:D108-10.; Mrázek J., Gaynon L.H., Karlin S. Frequent oligonucleotide motifs in genomes of three streptococci. Nucl. Acids Res. 2002;19:4216-4221.; NVIDIA CUDA programming guide 3.2. [http://developer.download.nvidia.com/compute/cuda/3_2/toolkit/docs/CUDA_C_Programming_Guide.pdf]; Osada R., Zaslavsky E., Singh. M. Comparative analysis of methods for representing and searching for transcription factor binding sites. Bioinformatics 2004;20(18):3516-3525.; Pesole G., Liuni S., Dsouza M. PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance. Bioinformatics. 2000;16:439-450.; Pevzner P.A., Sze S.H. Combinatorial approaches to finding subtle signals in DNA sequences. Proc. of the 8th Int. Conf. on Intelligent Systems for Molecular Biology (ISMB). 2000.; Portales-Casamar E., Thongjuea S., Kwon A.T., Arenillas D., Zhao X., Valen E., Yusuf D., Lenhard B., Wasserman W.W., Sandelin A. JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles. Nucl. Acids Res. 2010;38:D105-10.; Sukhwani B., Herbordt M.C. GPU acceleration of a production molecular docking code. Proc. of 2nd Workshop on General Purpose Processing on Graphics Processing Units. 2009.; Vishnevsky O.V., Gunbin K.V., Bocharnikov A.V., Berezikov E.V. Analysis of the conservative motifs in promoters of miRNA genes, expressed in different tissues of mammalians. Evolutionary Biology Concepts, Molecular and Morphological Evolution. 2011.; Vishnevsky O.V., Kolchanov N.A. ARGO: a web system for the detection of degenerate motifs and large-scale recognition of eukaryotic promoters. Nucl. Acids Res. 2005;33(Web Server issue):417-22.; Yooseph S., Sutton G., Rusch D.B., Halpern A.L., Williamson S.J., Remington K., Eisen J.A., Heidelberg K.B., Manning G., Li W., Jaroszewski L., Cieplak P., Miller C.S., Li H., Mashiyama S.T., Joachimiak M.P., van Belle C., Chandonia J.M., Soergel D.A., Zhai Y., Natarajan K., Lee S., Raphael B.J., Bafna V., Friedman R., Brenner S.E., Godzik A., Eisenberg D., Dixon J.E., Taylor S.S., Strausberg R.L., Frazier M., Venter J.C. The sorcerer II global ocean sampling expedition: expanding the universe of protein families. PLoS Biol. 2007:5(3):e16.; https://vavilov.elpub.ru/jour/article/view/482

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