Engineering Escherichia coli for Urease-Driven Synthesis of Metal Oxide Nanomaterials.

Authors: Wu ZY; The U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Lin AYW; The Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Müller IE; The U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Zhao Z; The U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Mouncey NJ; The U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Ercius P; The Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Yoshikuni Y; The U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; U.S. Department of Energy Center for Bioenergy and Bioproducts Innovation (CABBI), Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.; Energy and Biosciences Institute, University of California, Berkeley, Berkeley, California 94720, United States.; Global Institution for Collaborative Research and Education, Hokkaido University, Hokkaido 060-8589, Japan.

Source: ACS synthetic biology [ACS Synth Biol] 2026 Jun 19; Vol. 15 (6), pp. 2264-2273. Date of Electronic Publication: 2026 Jun 08.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101575075 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2161-5063 (Electronic) Linking ISSN: 21615063 NLM ISO Abbreviation: ACS Synth Biol Subsets: MEDLINE

MeSH Terms: Escherichia coli*/genetics , Escherichia coli*/metabolism , Urease*/metabolism , Urease*/genetics , Metal Nanoparticles*/chemistry , Nanostructures*/chemistry, Titanium/chemistry ; Titanium/metabolism ; Sporosarcina/genetics ; Sporosarcina/enzymology ; Ferric Compounds/chemistry ; Ferric Compounds/metabolism ; Calcium Carbonate/metabolism ; Calcium Carbonate/chemistry ; Calcium Phosphates/metabolism ; Calcium Phosphates/chemistry ; Oxides/chemistry ; Oxides/metabolism

SCR Organism: Sporosarcina pasteurii

Sporosarcina pasteurii urease gene expression regulation mechanism overcomes urease inhibition by hydrocarbons.

Authors: Comadran-Casas C; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK. Electronic address: Carla.ComadranCasas@glasgow.ac.uk., Cholet F; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK., Ogundero A; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK., Poursat BAJ; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK., Smith CJ; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK., Sloan WT; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK., Bass AM; School of Geographical & Earth Sciences, College of Science and Engineering, University of Glasgow, Glasgow, UK., MacDonald J; School of Geographical & Earth Sciences, College of Science and Engineering, University of Glasgow, Glasgow, UK., Unluer C; Department of Civil Engineering and Management, University of Manchester, Manchester, UK., Gauchotte-Lindsay C; James Watt School of Engineering, College of Science and Engineering, Department of Infrastructure and Environment, the University of Glasgow, Glasgow, UK.

Source: Journal of hazardous materials [J Hazard Mater] 2026 Jun 15; Vol. 511, pp. 142148. Date of Electronic Publication: 2026 Apr 21.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 9422688 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-3336 (Electronic) Linking ISSN: 03043894 NLM ISO Abbreviation: J Hazard Mater Subsets: MEDLINE

MeSH Terms: Sporosarcina*/genetics , Sporosarcina*/drug effects , Sporosarcina*/enzymology , Sporosarcina*/growth & development , Urease*/genetics , Urease*/antagonists & inhibitors , Urease*/metabolism , Hydrocarbons*/pharmacology , Hydrocarbons*/toxicity , Gene Expression Regulation, Bacterial*/drug effects , Gene Expression Regulation, Enzymologic*/drug effects

SCR Organism: Sporosarcina pasteurii

Computational design of a multi-epitope vaccine against Helicobacter pylori targeting CagA, FliD, urease, and OipA with cholera toxin B subunit (CTB) adjuvant.

Authors: Baniasadi Nejad N; Student Research Committee, Faculty of Pharmacy, Hormozgan University of Medical Sciences, Bandar Abbas, Iran., Shahbazi B; School of Pharmacy, Semnan University of Medical Sciences, Semnan, Iran.; Nervous System Stem Cells Research Center, Semnan University of Medical Sciences, Semnan, Iran., Sarkoohi P; Department of Pharmacology and Toxicology, Faculty of Pharmacy, Hormozgan University of Medical Sciences, Bandar Abbas, Iran., Ahmadi N; School of Pharmacy, Semnan University of Medical Sciences, Semnan, Iran., Ahmadi K; The Persian Gulf Marine Biotechnology Research Center, The Persian Gulf Biomedical Sciences Research Institute, Bushehr University of Medical Sciences, Bushehr, Iran. khadijeh_6482@yahoo.com.; Department of Medical Biotechnology, School of Paramedicine, Bushehr University of Medical Sciences, Bushehr, Iran. khadijeh_6482@yahoo.com.

Source: BMC microbiology [BMC Microbiol] 2026 Apr 25; Vol. 26 (1). Date of Electronic Publication: 2026 Apr 25.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100966981 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2180 (Electronic) Linking ISSN: 14712180 NLM ISO Abbreviation: BMC Microbiol Subsets: MEDLINE

MeSH Terms: Helicobacter pylori*/immunology , Helicobacter pylori*/genetics , Bacterial Proteins*/immunology , Bacterial Proteins*/genetics , Cholera Toxin*/immunology , Bacterial Vaccines*/immunology , Bacterial Vaccines*/genetics , Bacterial Vaccines*/chemistry , Helicobacter Infections*/prevention & control , Helicobacter Infections*/immunology , Helicobacter Infections*/microbiology, Antigens, Bacterial/immunology ; Antigens, Bacterial/genetics ; Urease/immunology ; Urease/genetics ; Epitopes, T-Lymphocyte/immunology ; Epitopes, B-Lymphocyte/immunology ; Toll-Like Receptor 2/immunology ; Toll-Like Receptor 4/immunology ; Virulence Factors/immunology ; Immunodominant Epitopes/immunology ; Molecular Dynamics Simulation ; Molecular Docking Simulation ; Immunoinformatics ; Protein Subunit Vaccines ; Humans ; Adjuvants, Immunologic ; Antibodies, Bacterial ; Computational Biology

Engineering an Optogenetic pH-Modulator in Bacteria.

Authors: Kuang J; Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts, USA., Armendarez OJ; Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts, USA., Chang WT; Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts, USA., Hausladen MM; Kostas Research Institute, Northeastern University, Burlington, Massachusetts, USA., Bonanno S; Department of Bioengineering, Northeastern University, Boston, Massachusetts, USA., Wilson DJ; Kostas Research Institute, Northeastern University, Burlington, Massachusetts, USA.; Department of Chemical Engineering, Northeastern University, Boston, Massachusetts, USA., Joshi NS; Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts, USA.; Department of Bioengineering, Northeastern University, Boston, Massachusetts, USA., Deravi LF; Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts, USA.

Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2026 Jul; Vol. 13 (42), pp. e24319. Date of Electronic Publication: 2026 May 07.

Publication Type: Journal Article

Journal Info: Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844 (Electronic) Linking ISSN: 21983844 NLM ISO Abbreviation: Adv Sci (Weinh) Subsets: MEDLINE

MeSH Terms: Optogenetics*/methods , Urease*/genetics , Urease*/metabolism , Escherichia coli*/genetics , Escherichia coli*/metabolism , Genetic Engineering*/methods , Bacteria*/genetics , Bacteria*/metabolism, Synthetic Biology/methods ; Promoter Regions, Genetic/genetics ; Hydrogen-Ion Concentration

Mechanistic insights into Helicobacter pylori urease inhibition by poplar propolis ethanol extract.

Authors: Yuan J; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China; Institut for Advanced Studies, Universiti Malaya, Kuala Lumpur, Malaysia., Li T; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China., Gao S; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China., Tang Y; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China., Ma S; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China., Lee HY; Tropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur, Malaysia. Electronic address: leehaiyen@um.edu.my., Chin KL; Institut for Advanced Studies, Universiti Malaya, Kuala Lumpur, Malaysia; Department of Medical Microbiology, Universiti Malaya, Kuala Lumpur, Malaysia. Electronic address: chinkimling@um.edu.my., Xuan H; College of Agriculture and Biology, Liaocheng University, Liaocheng, People's Republic of China. Electronic address: xuanhongzhuan@lcu.edu.cn.

Source: Journal of ethnopharmacology [J Ethnopharmacol] 2026 Jun 28; Vol. 365, pp. 121596. Date of Electronic Publication: 2026 Mar 28.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Sequoia Country of Publication: Ireland NLM ID: 7903310 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1872-7573 (Electronic) Linking ISSN: 03788741 NLM ISO Abbreviation: J Ethnopharmacol Subsets: MEDLINE

MeSH Terms: Urease*/antagonists & inhibitors , Urease*/metabolism , Urease*/genetics , Propolis*/pharmacology , Propolis*/chemistry , Helicobacter pylori*/drug effects , Helicobacter pylori*/enzymology , Helicobacter pylori*/growth & development , Plant Extracts*/pharmacology , Plant Extracts*/chemistry , Anti-Bacterial Agents*/pharmacology , Anti-Bacterial Agents*/isolation & purification , Anti-Bacterial Agents*/chemistry , Populus*/chemistry , Enzyme Inhibitors*/pharmacology, Ethanol/chemistry ; Molecular Docking Simulation

Double-site rapid urease test versus histopathology for the diagnosis of Helicobacter pylori among patients with dyspepsia on proton pump inhibitors-A diagnostic accuracy study.

Authors: Yadav AI; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Jearth V; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India. vaneet.jearth@gmail.com., Sharma AK; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Singh AK; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Chauhan P; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Patial P; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Sekar A; Department of Pathology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Shah J; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Mandavdhare H; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Rana SS; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India., Dutta U; Department of Gastroenterology, Post Graduate Institute of Medical Education and Research, Chandigarh, 160 012, India.

Source: Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology [Indian J Gastroenterol] 2026 Aug; Vol. 45 (4), pp. 706-714. Date of Electronic Publication: 2025 Jun 12.

Publication Type: Journal Article; Comparative Study

Journal Info: Publisher: Springer India Country of Publication: India NLM ID: 8409436 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 0975-0711 (Electronic) Linking ISSN: 02548860 NLM ISO Abbreviation: Indian J Gastroenterol Subsets: MEDLINE

MeSH Terms: Helicobacter Infections*/diagnosis , Helicobacter Infections*/pathology , Helicobacter Infections*/complications , Helicobacter pylori*/isolation & purification , Helicobacter pylori*/genetics , Proton Pump Inhibitors*/adverse effects , Proton Pump Inhibitors*/administration & dosage , Dyspepsia*/etiology , Dyspepsia*/microbiology , Dyspepsia*/drug therapy , Urease*/analysis, Humans ; Prospective Studies ; Female ; Biopsy ; Sensitivity and Specificity ; Polymerase Chain Reaction ; Male ; Predictive Value of Tests ; Middle Aged ; Rapid Diagnostic Tests ; Adult

Antimicrobial peptide SAAP-148 inhibits Helicobacter pylori and is associated with membrane disruption, biofilm suppression, and reduced cell-associated urease activity.

Authors: Wang Y; National Center for Clinical Laboratories, Beijing Hospital, National Center for Gerontology, National Clinical Research Center for Gerontology, The Key Laboratory of Geriatrics of NHC, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, P.R. China., Zhang R; National Center for Clinical Laboratories, Beijing Hospital, National Center for Gerontology, National Clinical Research Center for Gerontology, The Key Laboratory of Geriatrics of NHC, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, P.R. China., Gao Z; National Center for Clinical Laboratories, Beijing Hospital, National Center for Gerontology, National Clinical Research Center for Gerontology, The Key Laboratory of Geriatrics of NHC, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, P.R. China., Liu X; Department of Gastroenterology, Emergency General Hospital, Beijing 100028, China., Pian Y; National Center for Clinical Laboratories, Beijing Hospital, National Center for Gerontology, National Clinical Research Center for Gerontology, The Key Laboratory of Geriatrics of NHC, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, P.R. China.

Source: Journal of applied microbiology [J Appl Microbiol] 2026 Jun 03; Vol. 137 (6).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9706280 Publication Model: Print Cited Medium: Internet ISSN: 1365-2672 (Electronic) Linking ISSN: 13645072 NLM ISO Abbreviation: J Appl Microbiol Subsets: MEDLINE

MeSH Terms: Helicobacter pylori*/drug effects , Helicobacter pylori*/enzymology , Helicobacter pylori*/physiology , Helicobacter pylori*/genetics , Biofilms*/drug effects , Urease*/metabolism , Anti-Bacterial Agents*/pharmacology , Antimicrobial Peptides*/pharmacology , Antimicrobial Cationic Peptides*/pharmacology, Epithelial Cells/drug effects ; Helicobacter Infections/microbiology ; Cell Membrane/drug effects ; Microbial Sensitivity Tests ; Humans

Urease-null soybean (eu3-a) under salt and copper stress: nitrogen metabolism, antioxidant defense, and arginine pathway genes.

Authors: de Souza SCR; Department of Plant Biology, Institute of Biology, University of Campinas, PO Box 6109, Campinas, SP, 13083-970, Brazil. sarahsouza@ufscar.br.; Department of Botany, Federal University of São Carlos, PO Box 676, São Carlos, SP, 13565-905, Brazil. sarahsouza@ufscar.br., Silveira NM; Department of Biodiversity, Institute of Biosciences, São Paulo State University (UNESP), PO Box 1515, Rio Claro, SP, 13506-900, Brazil., Tofanello VR; Department of Plant Biology, Institute of Biology, University of Campinas, PO Box 6109, Campinas, SP, 13083-970, Brazil., Polacco JC; Department of Biochemistry, Interdisciplinary Plant Group, University of Missouri, 117 Schweitzer Hall, Columbia, MO, 65211, USA., Mazzafera P; Department of Plant Biology, Institute of Biology, University of Campinas, PO Box 6109, Campinas, SP, 13083-970, Brazil.

Source: Planta [Planta] 2026 Apr 16; Vol. 263 (5). Date of Electronic Publication: 2026 Apr 16.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag [etc.] Country of Publication: Germany NLM ID: 1250576 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-2048 (Electronic) Linking ISSN: 00320935 NLM ISO Abbreviation: Planta Subsets: MEDLINE

MeSH Terms: Glycine max*/genetics , Glycine max*/physiology , Glycine max*/drug effects , Glycine max*/enzymology , Glycine max*/metabolism , Nitrogen*/metabolism , Copper*/toxicity , Urease*/genetics , Urease*/metabolism , Antioxidants*/metabolism , Arginine*/metabolism, Photosynthesis/drug effects ; Sodium Chloride/pharmacology ; Gene Expression Regulation, Plant/drug effects ; Plant Leaves/physiology ; Salt Stress ; Stress, Physiological

Structural landscape of bacterial urease: implications for catalyst and adaptation.

Authors: Putri ANH; Research Center for Genetic Engineering, National Research and Innovation Agency (BRIN), Bogor, Indonesia.; Department of Biochemistry, Faculty of Mathematics and Natural Science, IPB University, Bogor, Indonesia., Islami RH; Research Center for Genetic Engineering, National Research and Innovation Agency (BRIN), Bogor, Indonesia.; School of Life Sciences and Technology, Bandung Institute of Technology, Bandung, Indonesia., Andrianto D; Department of Biochemistry, Faculty of Mathematics and Natural Science, IPB University, Bogor, Indonesia. dimasandrianto@apps.ipb.ac.id., Pratama R; Department of Biochemistry, Faculty of Mathematics and Natural Science, IPB University, Bogor, Indonesia., Pangestu R; Research Center for Genetic Engineering, National Research and Innovation Agency (BRIN), Bogor, Indonesia. radityo.pangestu@brin.go.id.

Source: Archives of microbiology [Arch Microbiol] 2026 Feb 23; Vol. 208 (5). Date of Electronic Publication: 2026 Feb 23.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 0410427 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-072X (Electronic) Linking ISSN: 03028933 NLM ISO Abbreviation: Arch Microbiol Subsets: MEDLINE

MeSH Terms: Urease*/chemistry , Urease*/metabolism , Urease*/genetics , Bacteria*/enzymology , Bacteria*/genetics , Bacteria*/chemistry , Bacterial Proteins*/chemistry , Bacterial Proteins*/metabolism , Bacterial Proteins*/genetics, Nickel/metabolism ; Catalytic Domain ; Protein Conformation ; Catalysis ; Models, Molecular ; Adaptation, Physiological ; Hydrogen-Ion Concentration

Urease promotes pH homeostasis and growth of Staphylococcus aureus in skin-like conditions.

Authors: Costa FG; Department of Immunology and Microbiology, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA., Horswill AR; Department of Immunology and Microbiology, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.; Department of Veterans Affairs, Eastern Colorado Healthcare System, Aurora, Colorado, USA.

Source: Journal of bacteriology [J Bacteriol] 2025 Oct 23; Vol. 207 (10), pp. e0020825. Date of Electronic Publication: 2025 Sep 08.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 2985120R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5530 (Electronic) Linking ISSN: 00219193 NLM ISO Abbreviation: J Bacteriol Subsets: MEDLINE

MeSH Terms: Urease*/metabolism , Urease*/genetics , Skin*/microbiology , Staphylococcus aureus*/growth & development , Staphylococcus aureus*/enzymology , Staphylococcus aureus*/metabolism , Methicillin-Resistant Staphylococcus aureus*/growth & development , Methicillin-Resistant Staphylococcus aureus*/enzymology , Methicillin-Resistant Staphylococcus aureus*/metabolism , Methicillin-Resistant Staphylococcus aureus*/genetics , Homeostasis*, Bacterial Proteins/metabolism ; Bacterial Proteins/genetics ; Urea/metabolism ; Ammonia/metabolism ; Hydrogen-Ion Concentration ; Humans

Genomic Analysis and Biomineralization Efficacy of Bacillus megaterium SS3 for Improving Durability Properties of Building Material.

Authors: Sharma B; Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, 147004, Punjab, India., Sharma S; Department of Civil Engineering, Thapar Institute of Engineering & Technology, Patiala, 147004, Punjab, India., Medicherla KM; School of Life and Basic Sciences, Jaipur National University, Jagatpura, Jaipur, 302017, India., Reddy SM; Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, 147004, Punjab, India. msreddy@thapar.edu.

Source: Molecular biotechnology [Mol Biotechnol] 2026 Apr; Vol. 68 (4), pp. 2037-2052. Date of Electronic Publication: 2025 Aug 07.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: Switzerland NLM ID: 9423533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1559-0305 (Electronic) Linking ISSN: 10736085 NLM ISO Abbreviation: Mol Biotechnol Subsets: MEDLINE

MeSH Terms: Bacillus megaterium*/genetics , Bacillus megaterium*/metabolism , Bacillus megaterium*/enzymology , Urease*/genetics , Urease*/metabolism , Urease*/chemistry , Construction Materials*/microbiology , Biomineralization*, Calcium Carbonate/metabolism ; Calcium Carbonate/chemistry ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Bacterial Proteins/chemistry ; Genomics/methods ; Urea/metabolism ; Molecular Docking Simulation ; Soil Microbiology ; Genome, Bacterial ; Whole Genome Sequencing

Urease in acetogenic Lachnospiraceae drives urea carbon salvage in SCFA pools.

Authors: Firth IJ; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Sim MAR; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Fitzgerald BG; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Moore AE; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Pittao CR; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Gianetto-Hill C; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Hess S; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Sweeney AR; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Allen-Vercoe E; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada., Sorbara MT; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada.

Source: Gut microbes [Gut Microbes] 2025 Dec; Vol. 17 (1), pp. 2492376. Date of Electronic Publication: 2025 Apr 15.

Publication Type: Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101495343 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1949-0984 (Electronic) Linking ISSN: 19490976 NLM ISO Abbreviation: Gut Microbes Subsets: MEDLINE

MeSH Terms: Urease*/metabolism , Urease*/genetics , Urea*/metabolism , Fatty Acids, Volatile*/metabolism , Carbon*/metabolism , Eubacteriales*/enzymology , Eubacteriales*/metabolism , Eubacteriales*/genetics , Eubacteriales*/growth & development , Bacterial Proteins*/metabolism , Bacterial Proteins*/genetics, Colon/microbiology ; Gastrointestinal Microbiome ; Animals ; Mice ; Humans ; Hydrogen-Ion Concentration

Fur-regulated urease contributes to the environmental adaptation of Yersinia pseudotuberculosis.

Authors: Wang J; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Fu P; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., He X; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Liu Y; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Zuo Y; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Wei Z; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Wang Y; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Yang Y; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Li C; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Shen X; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China., Zhu L; State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.

Source: Microbiology spectrum [Microbiol Spectr] 2025 Apr; Vol. 13 (4), pp. e0275624. Date of Electronic Publication: 2025 Feb 25.

Publication Type: Journal Article

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

MeSH Terms: Urease*/metabolism , Urease*/genetics , Bacterial Proteins*/metabolism , Bacterial Proteins*/genetics , Yersinia pseudotuberculosis*/genetics , Yersinia pseudotuberculosis*/enzymology , Yersinia pseudotuberculosis*/pathogenicity , Yersinia pseudotuberculosis*/metabolism , Yersinia pseudotuberculosis*/physiology , Repressor Proteins*/metabolism , Repressor Proteins*/genetics, Manganese/metabolism ; Biofilms/growth & development ; Yersinia pseudotuberculosis Infections/microbiology ; Gene Expression Regulation, Bacterial ; Virulence ; Promoter Regions, Genetic ; Adaptation, Physiological ; Animals

Genomic insights on cgMLST markers, drug resistance, and urease cluster of Proteus mirabilis strains.

Authors: Lian S; School of Engineering Medicine, Beijing Advanced Innovation Center for Big Data-Based Precision Medicine, Interdisciplinary Innovation Institute of Medicine and Engineering, Beihang University, Beijing, China., Liu Y; State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China., Hu S; State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China., Shen C; Department of Urology, The Second Affiliated Hospital of Dalian Medical University, Dalian, Liaoning, China., Ma Y; CapitalBio Technology, Beijing, China., Yin P; School of Engineering Medicine, Beijing Advanced Innovation Center for Big Data-Based Precision Medicine, Interdisciplinary Innovation Institute of Medicine and Engineering, Beihang University, Beijing, China., He Z; School of Engineering Medicine, Beijing Advanced Innovation Center for Big Data-Based Precision Medicine, Interdisciplinary Innovation Institute of Medicine and Engineering, Beihang University, Beijing, China.

Source: Microbiology spectrum [Microbiol Spectr] 2025 Jan 07; Vol. 13 (1), pp. e0099224. Date of Electronic Publication: 2024 Dec 06.

Publication Type: Journal Article

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

MeSH Terms: Proteus mirabilis*/genetics , Proteus mirabilis*/drug effects , Proteus mirabilis*/enzymology , Anti-Bacterial Agents*/pharmacology , Urease*/genetics, Proteus Infections/microbiology ; Genome, Bacterial/genetics ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Quinolones/pharmacology ; Carbapenems/pharmacology ; Drug Resistance, Multiple, Bacterial/genetics ; Drug Resistance, Bacterial/genetics ; Humans ; Multilocus Sequence Typing ; Phylogeny ; Genomics ; Microbial Sensitivity Tests ; Multigene Family

Dual urea utilization enzyme systems in Symbiodiniaceae coral symbionts under warming.

Authors: Li T; Guangdong Provincial Key Laboratory of Marine Disaster Prediction and Prevention, Shantou University, Shantou, 515063, China. tchli@stu.edu.cn.; Institute of Marine Sciences and Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou , 515063, China. tchli@stu.edu.cn., Zhang B; Guangdong Provincial Key Laboratory of Marine Disaster Prediction and Prevention, Shantou University, Shantou, 515063, China., Liang H; Guangdong Provincial Key Laboratory of Marine Disaster Prediction and Prevention, Shantou University, Shantou, 515063, China., Huang J; Guangdong Provincial Key Laboratory of Marine Disaster Prediction and Prevention, Shantou University, Shantou, 515063, China., Sun Y; State Key Laboratory of Tropical Oceanography; Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Chinese Academy of Sciences, Guangzhou, 510301, China.; CAS-HKUST Sanya Joint Laboratory of Marine Science Research and Key Laboratory of Tropical Marine Biotechnology of Hainan Province, Tropical Marine Biological Research Station in Hainan, Chinese Academy of Sciences, Sanya, 572000, China., Wei Z; State Key Laboratory of Tropical Oceanography; Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Chinese Academy of Sciences, Guangzhou, 510301, China., Manullang C; Guangdong Provincial Key Laboratory of Marine Disaster Prediction and Prevention, Shantou University, Shantou, 515063, China., Huang H; State Key Laboratory of Tropical Oceanography; Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Chinese Academy of Sciences, Guangzhou, 510301, China.; CAS-HKUST Sanya Joint Laboratory of Marine Science Research and Key Laboratory of Tropical Marine Biotechnology of Hainan Province, Tropical Marine Biological Research Station in Hainan, Chinese Academy of Sciences, Sanya, 572000, China., Lin S; Department of Marine Sciences, University of Connecticut, Groton, CT 06340, USA. senjie.lin@uconn.edu.

Source: BMC biology [BMC Biol] 2026 Apr 27; Vol. 24 (1). Date of Electronic Publication: 2026 Apr 27.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007 (Electronic) Linking ISSN: 17417007 NLM ISO Abbreviation: BMC Biol Subsets: MEDLINE

MeSH Terms: Urea*/metabolism , Dinoflagellida*/enzymology , Dinoflagellida*/genetics , Dinoflagellida*/physiology , Anthozoa*/physiology , Urease*/metabolism , Urease*/genetics , Symbiosis*, Animals ; Phylogeny

A novel urease gene structure of Sporosarcina pasteurii with double operons.

Authors: Pei D; College of Sciences, National University of Defense Technology, Changsha, Hunan, China. 397141499@qq.com.; China Astronaut Research and Training Center, Beijing, China. 397141499@qq.com., Liu Z; Academy of Chemical Defense, Academy of Military Science, Beijing, China., Hu B; College of Sciences, National University of Defense Technology, Changsha, Hunan, China.

Source: Molecular genetics and genomics : MGG [Mol Genet Genomics] 2025 Feb 22; Vol. 300 (1), pp. 25. Date of Electronic Publication: 2025 Feb 22.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 101093320 Publication Model: Electronic Cited Medium: Internet ISSN: 1617-4623 (Electronic) Linking ISSN: 16174623 NLM ISO Abbreviation: Mol Genet Genomics Subsets: MEDLINE

MeSH Terms: Urease*/genetics , Urease*/metabolism , Sporosarcina*/genetics , Sporosarcina*/enzymology , Sporosarcina*/growth & development , Operon*/genetics , Bacterial Proteins*/genetics, Calcium Carbonate/metabolism ; Promoter Regions, Genetic ; Gene Expression Regulation, Bacterial ; Transcription Initiation Site

SCR Organism: Sporosarcina pasteurii

Bile Acid Deconjugation and Anti-Helicobacter pylori Activity of Limosilactobacillus reuteri DSM 34531.

Authors: Otaru N; Health, Nutrition & Care (HNC), DSM-Firmenich, Kaiseraugst, Switzerland., Bird JK; Bird Scientific Writing, Wassenaar, Netherlands., Soldi S; AAT-Advanced Analytical Technologies, Fiorenzuola d'Arda, Piacenza, Italy., Atanasova V; Health, Nutrition & Care (HNC), DSM-Firmenich, Kaiseraugst, Switzerland., Sagheddu V; AAT-Advanced Analytical Technologies, Fiorenzuola d'Arda, Piacenza, Italy., Ver Loren van Themaat E; Data Science, DSM-Firmenich, Delft, Netherlands., van Leeuwen J; Data Science, DSM-Firmenich, Delft, Netherlands., Steinert RE; Health, Nutrition & Care (HNC), DSM-Firmenich, Kaiseraugst, Switzerland.; Adelaide Medical School, Faculty of Health and Medical Sciences, CRE in Translating Nutritional Science to Good Health, The University of Adelaide, Adelaide, Australia.

Source: Molecular nutrition & food research [Mol Nutr Food Res] 2026 Jul; Vol. 70 (13), pp. e70514.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101231818 Publication Model: Print Cited Medium: Internet ISSN: 1613-4133 (Electronic) Linking ISSN: 16134125 NLM ISO Abbreviation: Mol Nutr Food Res Subsets: MEDLINE

MeSH Terms: Helicobacter pylori*/drug effects , Limosilactobacillus reuteri*/genetics , Limosilactobacillus reuteri*/enzymology , Limosilactobacillus reuteri*/metabolism , Bile Acids and Salts*/metabolism , Amidohydrolases*/genetics , Amidohydrolases*/metabolism, Probiotics/pharmacology ; Urease/metabolism ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Humans

Characterization of urease active calcite-producing strain YX-3 combined with the whole genome.

Authors: Zhang S; College of Life Science, Northwest University, 229 Tai bai North Rd, Xi'an, Shaanxi, 710069, China; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, 710069, China., Liu S; College of Life Science, Northwest University, 229 Tai bai North Rd, Xi'an, Shaanxi, 710069, China., Chen M; College of Life Science, Northwest University, 229 Tai bai North Rd, Xi'an, Shaanxi, 710069, China., Lu J; College of Life Science, Northwest University, 229 Tai bai North Rd, Xi'an, Shaanxi, 710069, China., Ma Y; College of Life Science, Northwest University, 229 Tai bai North Rd, Xi'an, Shaanxi, 710069, China; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, 710069, China. Electronic address: mayanling@nwu.edu.cn.

Source: Environmental research [Environ Res] 2024 Dec 01; Vol. 262 (Pt 1), pp. 119855. Date of Electronic Publication: 2024 Aug 27.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 0147621 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-0953 (Electronic) Linking ISSN: 00139351 NLM ISO Abbreviation: Environ Res Subsets: MEDLINE

MeSH Terms: Urease*/genetics , Urease*/metabolism , Urease*/chemistry , Calcium Carbonate*/metabolism , Calcium Carbonate*/chemistry, Nickel/metabolism ; Sporosarcina/enzymology ; Sporosarcina/genetics ; Molecular Docking Simulation ; Genome, Bacterial ; Molecular Dynamics Simulation

SCR Organism: Sporosarcina pasteurii

Structural Analysis and Molecular Dynamics Simulations of Urease From Ureaplasma parvum.

Authors: Wu HN; Department of Developmental Medicine, Research Institute, Osaka Women's and Children's Hospital, Izumi City 594-1101 Osaka, Japan., Fujita J; Graduate School of Frontier Biosciences, The University of Osaka, 1-3 Yamadaoka, Suita, Osaka 565-0871, Japan; JEOL YOKOGUSHI Research Alliance Laboratories, The University of Osaka, 1-3 Yamadaoka, Suita, Osaka 565-0871, Japan; Graduate School of Pharmaceutical Sciences, The University of Osaka, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan., Nakura Y; Department of Developmental Medicine, Research Institute, Osaka Women's and Children's Hospital, Izumi City 594-1101 Osaka, Japan., Inoue M; Graduate School of Medical Life Science, Yokohama City University, 1-7-29, Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan., Suzuki K; The Research Foundation for Microbial Diseases of Osaka University, 3-1 Yamadaoka, Suita, Osaka 565-0871, Japan; BIKEN-RIMD NGS Laboratory, Research Institute for Microbial Diseases, The University of Osaka, 3-1 Yamadaoka, Suita, Osaka 565-0871, Japan., Ekimoto T; Graduate School of Medical Life Science, Yokohama City University, 1-7-29, Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan., Yin B; Department of Developmental Medicine, Research Institute, Osaka Women's and Children's Hospital, Izumi City 594-1101 Osaka, Japan; Department of Pediatric and Neonatal-Perinatal Research, Affiliate Graduate School of Medicine, The University of Osaka, 2-2 Yamadaoka, Suita 565-0871 Osaka, Japan., Fukuda Y; Graduate School of Pharmaceutical Sciences, The University of Osaka, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives (OTRI), The University of Osaka, Japan., Harada K; Graduate School of Pharmaceutical Sciences, The University of Osaka, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan., Inoue T; Graduate School of Pharmaceutical Sciences, The University of Osaka, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives (OTRI), The University of Osaka, Japan., Ikeguchi M; Graduate School of Medical Life Science, Yokohama City University, 1-7-29, Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan; RIKEN Center for Computational Science, 1-7-22, Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan., Namba K; Graduate School of Frontier Biosciences, The University of Osaka, 1-3 Yamadaoka, Suita, Osaka 565-0871, Japan; JEOL YOKOGUSHI Research Alliance Laboratories, The University of Osaka, 1-3 Yamadaoka, Suita, Osaka 565-0871, Japan., Yanagihara I; Department of Developmental Medicine, Research Institute, Osaka Women's and Children's Hospital, Izumi City 594-1101 Osaka, Japan; Department of Pediatric and Neonatal-Perinatal Research, Affiliate Graduate School of Medicine, The University of Osaka, 2-2 Yamadaoka, Suita 565-0871 Osaka, Japan. Electronic address: itaruy@wch.opho.jp.

Source: Journal of molecular biology [J Mol Biol] 2025 Nov 01; Vol. 437 (21), pp. 169368. Date of Electronic Publication: 2025 Aug 05.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

MeSH Terms: Urease*/chemistry , Urease*/metabolism , Urease*/genetics , Ureaplasma*/enzymology, Bacterial Proteins/chemistry ; Bacterial Proteins/metabolism ; Molecular Dynamics Simulation ; Cryoelectron Microscopy ; Catalytic Domain ; Kinetics ; Protein Conformation

Exploration of urease-aided calcium carbonate mineralization by enzyme analyses of Neobacillus mesonae strain NS-6.

Authors: Ma Z; College of Life Science, Northwest University, Xi'an, Shaanxi, China.; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, China., Chen M; College of Life Science, Northwest University, Xi'an, Shaanxi, China.; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, China., Lu J; College of Life Science, Northwest University, Xi'an, Shaanxi, China.; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, China., Liu S; College of Life Science, Northwest University, Xi'an, Shaanxi, China.; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, China., Ma Y; College of Life Science, Northwest University, Xi'an, Shaanxi, China.; Shaanxi Provincial Key Laboratory of Biotechnology, Key Laboratory of Resources Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, Shaanxi, China.

Source: Microbiology spectrum [Microbiol Spectr] 2025 Jan 07; Vol. 13 (1), pp. e0189124. Date of Electronic Publication: 2024 Nov 29.

Publication Type: Journal Article

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

MeSH Terms: Urease*/metabolism , Urease*/genetics , Urease*/chemistry , Calcium Carbonate*/metabolism , Calcium Carbonate*/chemistry , Nickel*/metabolism, Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Bacterial Proteins/chemistry ; Bacillaceae/enzymology ; Bacillaceae/genetics ; Bacillaceae/metabolism ; Urea/metabolism ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Mutation