Urea assimilation and oxidation support activity of phylogenetically diverse microbial communities of the dark ocean.

Authors: Arandia-Gorostidi, Nestor^1,2 arandia@icm.csic.es, Jaffe, Alexander L², Parada, Alma E², Kapili, Bennett J², Casciotti, Karen L^2,3, Salcedo, Rebecca S R², Baumas, Chloé M J², Dekas, Anne E² arandia@icm.csic.es

Source: ISME Journal: Multidisciplinary Journal of Microbial Ecology. Jan2024, Vol. 18 Issue 1, p1-13. 13p.

Subject Terms: *Urease genetics, *Proteobacteria, *Verrucomicrobia, *Microbial ecology, *Marine ecology

Selection of a fully human single domain antibody specific to Helicobacter pylori urease.

Authors: Fouladi, Mehdi^1,2,3, Sarhadi, Shamim², Tohidkia, Mohammadreza¹ tohidkia86@yahoo.com, Fahimi, Farnaz^1,2, Samadi, Naser², Sadeghi, Javid⁴, Barar, Jaleh^1,5, Omidi, Yadollah^1,2,5 yomidi@tbzmed.ac.ir

Source: Applied Microbiology & Biotechnology. Apr2019, Vol. 103 Issue 8, p3407-3420. 14p.

Subject Terms: *Helicobacter pylori, *Urease genetics, *Bacteriophages, *Gene targeting, *Immunoglobulins

Recent advances in design of new urease inhibitors: A review.

Authors: Kafarski, Paweł¹, Talma, Michał¹

Source: Journal of Advanced Research. Sep2018, Vol. 13, p101-112. 12p.

Subject Terms: *Urease genetics, *Enzyme inhibitors, *Bacterial enzymes, *Microbial virulence, *Pharmaceutical chemistry, *Molecular models

Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle

Authors: Liu, Sijia, Yu, Zhongtang, Zhong, Huiyue, Zheng, Nan, Huws, Sharon, Wang, Jiaqi, Zhao, Shengguo

Source: Microbiome
Microbiome, Vol 11, Iss 1, Pp 1-18 (2023)
Liu, S, Yu, Z, Zhong, H, Zheng, N, Huws, S, Wang, J & Zhao, S 2023, 'Functional gene-guided enrichment plus in situ microsphere cultivation enables isolating new crucial ureolytic bacteria from the rumen of cattle', Microbiome, vol. 11, 76. https://doi.org/10.1186/s40168-023-01510-4

Subject Terms: Rumen, Urease - genetics - metabolism, Nitrogen, In situ cultivation, Amino Acids - metabolism, Isolation, Microbial ecology, Urea - metabolism, Animals, Urea, Amino Acids, Nitrogen - metabolism, 2. Zero hunger, Ruminants - metabolism, Bacteria, Research, QR100-130, Ruminants, Urease, Microspheres, Ureolytic bacteria, Cattle, Rumen - microbiology, Agarose microsphere embedding

File Description: application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/37060083
https://doaj.org/article/fff5bd74eb18469aa31ad987149e29b1

AMMONIA TRAP FOR DECREASING AMMONIA LEVEL IN BROILER HOUSE - A PATENTED SYSTEM DESIGN.

Authors: COSKAN, Ali¹, ATILGAN, Atilgan² atilganatilgan@sdu.edu.tr

Source: Scientific Papers. Series D. Animal Science. 2018, Vol. 61 Issue 2, p145-149. 5p.

Subject Terms: *Broiler chickens, *Urease genetics, *Ammonium phosphates, *Animal breeding, *Agricultural productivity

Structural insights into how GTP-dependent conformational changes in a metallochaperone UreG facilitate urease maturation.

Authors: Man Hon Yuen¹, Yu Hang Fong¹, Yap Shing Nim¹, Pak Ho Lau¹, Kam-Bo Wong¹

Source: Proceedings of the National Academy of Sciences of the United States of America. 12/19/2017, Vol. 114 Issue 51, pE10890-E10898. 9p.

Subject Terms: *Urease genetics, *G proteins, *Helicobacter pylori, *Nickel, *Metalloenzymes

Polymerase chain reaction–hybridization method using urease gene sequences for high-throughput Ureaplasma urealyticum and Ureaplasma parvum detection and differentiation.

Authors: Xu, Chen¹, Zhang, Nan², Huo, Qianyu², Chen, Minghui², Wang, Rengfeng², Liu, Zhili², Li, Xue², Liu, Yunde², Bao, Huijing² kris_10713@126.com

Source: Analytical Biochemistry. Apr2016, Vol. 499, p57-62. 6p.

Subject Terms: *Polymerase chain reaction, *Urease genetics, *Nucleotide sequence, *DNA probes, *DNA primers

Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria

Authors: Sangita Ganesh, Anthony D Bertagnolli, Laura A Bristow, Cory C Padilla, Nigel Blackwood, Montserrat Aldunate, Annie Bourbonnais, Mark A Altabet, Rex R Malmstrom, Tanja Woyke, Osvaldo Ulloa, Konstantinos T Konstantinidis, Bo Thamdrup, Frank J Stewart

Source: ISME JOURNAL
Ganesh, S, Bertagnolli, A D, Bristow, L A, Padilla, C C, Blackwood, N, Aldunate, M, Bourbonnais, A, Altabet, M A, Malmstrom, R R, Woyke, T, Ulloa, O, Konstantinidis, K T, Thamdrup, B & Stewart, F J 2018, 'Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria', The ISME Journal, vol. 12, pp. 2706–2722. https://doi.org/10.1038/s41396-018-0223-9
The ISME Journal: Multidisciplinary Journal of Microbial Ecology, vol 12, iss 11

Subject Terms: Carbon-Nitrogen Lyases/genetics, 0301 basic medicine, Technology, Nitrogen, Oceans and Seas, Bacteria/genetics, Urease/genetics, Microbiology, 03 medical and health sciences, Ammonium Compounds, Carbon-Nitrogen Lyases, Genetics, Nitrogen/metabolism, Seawater/microbiology, Seawater, Anaerobiosis, 14. Life underwater, Life Below Water, 0303 health sciences, Ecology, Bacteria, Gene Expression Profiling, Human Genome, Genomics, Biological Sciences, Urease, 6. Clean water, Environmental sciences, Biological sciences, Ammonium Compounds/metabolism, 13. Climate action, Single-Cell Analysis, Oxidation-Reduction, Environmental Sciences, Biotechnology

File Description: application/pdf

Access URL: https://www.nature.com/articles/s41396-018-0223-9.pdf
https://pubmed.ncbi.nlm.nih.gov/29991764
https://hdl.handle.net/21.11116/0000-0003-B890-A
https://hdl.handle.net/21.11116/0000-0003-B892-8
https://portal.findresearcher.sdu.dk/da/publications/4b834f89-55c7-4b54-9059-996cfde6e5e3
https://doi.org/10.1038/s41396-018-0223-9
https://findresearcher.sdu.dk/ws/files/151951809/Single_cell_genomic_and_transcriptomic_evidence_for_the_use_of_alternative_nitrogen_substrates_by_anammox_bacteria.pdf
https://portal.findresearcher.sdu.dk/da/publications/4b834f89-55c7-4b54-9059-996cfde6e5e3
https://doi.org/10.1038/s41396-018-0223-9
https://escholarship.org/uc/item/4360h9j0
https://escholarship.org/content/qt4360h9j0/qt4360h9j0.pdf

Inactivation of Phaeodactylum tricornutum urease gene using transcription activator-like effector nuclease-based targeted mutagenesis.

Authors: Weyman, Philip D.¹, Beeri, Karen², Lefebvre, Stephane C.², Rivera, Josefa², McCarthy, James K.², Heuberger, Adam L.³, Peers, Graham⁴, Allen, Andrew E.^2,5, Dupont, Christopher L.²

Source: Plant Biotechnology Journal. May2015, Vol. 13 Issue 4, p460-470. 11p.

Subject Terms: *Phaeodactylum tricornutum, *Urease genetics, *Genetic transcription in plants, *Nuclease genetics, *Mutagenesis, *Photosynthesis

Palladium-mediated oxidative carbonylation reactions for the synthesis of ¹¹C-radiolabelled ureas.

Authors: Kealey, Steven^1,2, Husbands, Stephen M.³, Bennacef, Idriss⁴, Gee, Antony D.⁵, Passchier, Jan²

Source: Journal of Labelled Compounds & Radiopharmaceuticals. Apr2014, Vol. 57 Issue 4, p202-208. 7p.

Subject Terms: *Urease genetics, *Carbonylation, *Radiolabeling, *Radioactive tracers, *Positron emission tomography, *Aliphatic amines

Analysis of a Soluble (UreD:UreF:UreG) Accessory Protein Complex and Its Interactions with Klebsiella aerogenes Urease by Mass Spectrometry.

Authors: Farrugia, Mark¹, Han, Linjie², Zhong, Yueyang², Boer, Jodi, Ruotolo, Brandon² bruotolo@umich.edu, Hausinger, Robert hausinge@msu.edu

Source: Journal of the American Society for Mass Spectrometry. Sep2013, Vol. 24 Issue 9, p1328-1337. 10p.

Subject Terms: *Klebsiella, *Urease genetics, *Mass spectrometry, *Developmental biology, *Maltose, *Maltose-binding proteins

Urease gene-containing Archaea dominate autotrophic ammonia oxidation in two acid soils.

Authors: Lu, Lu^1,2, Jia, Zhongjun¹

Source: Environmental Microbiology. Jun2013, Vol. 15 Issue 6, p1795-1809. 15p. 1 Black and White Photograph, 3 Diagrams, 4 Graphs.

Subject Terms: *Urease genetics, *Archaebacteria, *Autotrophic bacteria, *Oxidation of ammonia, *Acid soils, *Nitrogen cycle, *Urea, *Hydrolysis

Opinion – Nickel and urease in plants: Still many knowledge gaps

Authors: Polacco, Joe C.¹ PolaccoJ@missouri.edu, Mazzafera, Paulo², Tezotto, Tiago³

Source: Plant Science. Feb2013, Vol. 199-200, p79-90. 12p.

Subject Terms: *Urease genetics, *Nickel compounds, *Plant enzymes, *Arabidopsis, *Amino acids, *Plant metabolism

Impact of foliar nickel application on urease activity, antioxidant metabolism and control of powdery mildew (Microsphaera diffusa) in soybean plants.

Authors: Barcelos, J. P. Q., Reis, H. P. G., Furlani Junior, E., Reis, A. R., Godoy, C. V., Gratão, P. L., Putti, F. F., Campos, M.

Source: Plant Pathology; Sep2018, Vol. 67 Issue 7, p1502-1513, 12p

Subject Terms: Foliar application of plant regulators, Nickel, Urease genetics, Antioxidant analysis, Powdery mildew diseases, Soybean

Actinobacillus pleuropneumoniae does not require urease activity to produce acute swine pleuropneumonia

Authors: Tascón Cabrero, Ruben-Ivan, Vazquez-Boland, Jose A, Gutierrez, Cesar B, Rodriguez-Barbosa, J Ignacio, Rodriguez-Ferri, Elias Fernando

Source: Tascón Cabrero, R-I, Vazquez-Boland, J A, Gutierrez, C B, Rodriguez-Barbosa, J I & Rodriguez-Ferri, E F 1997, 'Actinobacillus pleuropneumoniae does not require urease activity to produce acute swine pleuropneumonia', FEMS Microbiology Letters, vol. 148, no. 1, pp. 53-7. https://doi.org/10.1111/j.1574-6968.1997.tb10266.x

Subject Terms: DNA, Bacterial, Male, 0301 basic medicine, Pleuropneumonia/microbiology, Urease/metabolism, Swine, Swine Diseases/microbiology, Mice, Inbred Strains, Urease/genetics, Mice, 03 medical and health sciences, Bacterial Proteins, Animals, DNA, Bacterial/analysis, Actinobacillus pleuropneumoniae/pathogenicity, Swine Diseases, 0303 health sciences, Actinobacillus pleuropneumoniae/enzymology, Pleuropneumonia, Virulence, Bacterial Proteins/metabolism, Actinobacillus pleuropneumoniae, Urease, Actinobacillus pleuropneumoniae/genetics, 3. Good health, Blotting, Southern, Mutagenesis, DNA Transposable Elements, Female

File Description: application/pdf

Access URL: https://academic.oup.com/femsle/article-pdf/148/1/53/19098734/148-1-53.pdf
https://pubmed.ncbi.nlm.nih.gov/9066110

RovM and CsrA Negatively Regulate Urease Expression in Yersinia pseudotuberculosis.

Authors: Dai, Qingyun, Xu, Lei, Xiao, Lu, Zhu, Kaixiang, Song, Yunhong, Li, Changfu, Zhu, Lingfang, Shen, Xihui, Wang, Yao

Source: Frontiers in Microbiology; 2/27/2018, p1-N.PAG, 12p

Subject Terms: Yersinia pseudotuberculosis, Urease genetics, Messenger RNA, Genetics

Immobilization of urease onto cellulose spheres for the selective removal of urea.

Authors: Lv, Miaomiao, Ma, Xiaofei, Anderson, Debbie P., Chang, Peter R.

Source: Cellulose; Jan2018, Vol. 25 Issue 1, p233-243, 11p

Subject Terms: Urease genetics, Amidases, Cellulose synthase, Crystallinity, Crystal structure

Characterizing antigenic determinants in Helicobacter pylori CagA capable of detecting serum antibodies in children.

Authors: Min-Kyoung Shin, Jin-Su Jun, Soon-Wook Kwon, Dong-Hae Lee, Jong-Hun Ha, Jin-Sik Park, Hyung Lyun Kang, Seung Chul Baik, Ji Sook Park, Ji-Hyun Seo, Hee-Shang Youn, Myung Je Cho, Woo Kon Lee

Source: Pathogens & Disease; Nov2017, Vol. 75 Issue 8, p1-7, 7p, 3 Diagrams, 1 Chart, 1 Graph

Subject Terms: Helicobacter pylori, Gram-negative bacteria, Helicobacter pylori infections, Enzyme-linked immunosorbent assay, Urease genetics, Pathogenic microorganisms, Genetics, Diagnosis, Prevention

Response of soil microbial activities and microbial community structure to vanadium stress.

Authors: Xiao, Xi-Yuan¹, Wang, Ming-Wei¹, Zhu, Hui-Wen¹, Guo, Zhao-Hui¹ zhguo@csu.edu.cn, Han, Xiao-Qing¹, Zeng, Peng¹

Source: Ecotoxicology & Environmental Safety. Aug2017, Vol. 142, p200-206. 7p.

Subject Terms: Soil microbial ecology, Vanadium compounds, Urease genetics, Polymerase chain reaction methodology, Denaturing gradient gel electrophoresis, Standards

Comparative Genomics of All Three Campylobacter sputorum Biovars and a Novel Cattle-Associated C. sputorum Clade.

Authors: Miller, William G., Yee, Emma, Chapman, Mary H., Bono, James L.

Source: Genome Biology & Evolution; Jun2017, Vol. 9 Issue 6, p1513-1518, 6p

Subject Terms: Campylobacter, Genomics, Urease genetics, Comparative genomics, Catalase genetics