Efficient GPU Computation of Large Protein Solvent-Excluded Surface

Authors: PlateauHolleville, C., Maria, M., Merillou, S., Montes, M.

Source: IEEE Transactions on Visualization and Computer Graphics IEEE Trans. Visual. Comput. Graphics Visualization and Computer Graphics, IEEE Transactions on. 31(4):2101-2113 Apr, 2025

ANT-MOC: Scalable Neutral Particle Transport Using 3D Method of Characteristics on Multi-GPU Systems

Authors: Li, Shunde, Wang, Zongguo, Bu, Lingkun, Wang, Jue, Xin, Zhikuang, Li, Shigang, Wang, Yangang, Feng, Yangde, Shi, Peng, Hu, Yun, Chi, Xuebin

Source: SC23: International Conference for High Performance Computing, Networking, Storage and Analysis High Performance Computing, Networking, Storage and Analysis, SC23: International Conference for. :1-13 Nov, 2023

Relation: SC23: International Conference for High Performance Computing, Networking, Storage and Analysis

Leveraging the Compute Power of two HPC Systems for Higher-Dimensional Grid-Based Simulations with the Widely-Distributed Sparse Grid Combination Technique

Authors: Pollinger, Theresa, Van Craen, Alexander, Niethammer, Christoph, Breyer, Marcel, Pfluger, Dirk

Source: SC23: International Conference for High Performance Computing, Networking, Storage and Analysis High Performance Computing, Networking, Storage and Analysis, SC23: International Conference for. :1-15 Nov, 2023

Relation: SC23: International Conference for High Performance Computing, Networking, Storage and Analysis

Scalable adaptive algorithms for next-generation multiphase flow simulations

Authors: Saurabh, Kumar, Ishii, Masado, Khanwale, Makrand A., Sundar, Hari, Ganapathysubramanian, Baskar

Source: 2023 IEEE International Parallel and Distributed Processing Symposium (IPDPS) IPDPS Parallel and Distributed Processing Symposium (IPDPS), 2023 IEEE International. :590-601 May, 2023

Relation: 2023 IEEE International Parallel and Distributed Processing Symposium (IPDPS)

Towards an Automated AI Based Simulation Framework in Aerospace Engineering

Authors: Neda Ebrahimi Pour, Frank Dressel, Sabine Roller

Source: Proceedings of the 2025 International Conference on High Performance Computing in Asia-Pacific Region Workshops. :58-60

Subject Terms: Massively parallel algorithms, Machine learning, Applied computing, High-performance simulations, Massively parallel, Computing methodologies, Aerospace

Parallelization of the Banded Needleman & Wunsch Algorithm on UPMEM PiM Architecture for Long DNA Sequence Alignment

Authors: Mognol, Meven, Lavenier, Dominique, Legriel, Julien

Contributors: Lavenier, Dominique

Source: Proceedings of the 53rd International Conference on Parallel Processing. :1062-1071

Subject Terms: • Hardware → Memory and dense storage Processing-in-Memory, parallelism, [INFO.INFO-AR] Computer Science [cs]/Hardware Architecture [cs.AR], long read Alignment, Pattern matching, Theory of computation → Massively parallel algorithms Pattern matching • Hardware → Memory and dense storage Processing-in-Memory

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An Efficient and Scalable Approach to Build Co-occurrence Matrix for DNN's Embedding Layer

Authors: Petit, Quentin, Li, Chong, Emad, Nahid

Contributors: Petit, Quentin, Huawei Technologies France, Huawei Technologies France Boulogne-Billancourt, Maison de la Simulation (MDLS), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut National de Recherche en Informatique et en Automatique (Inria)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Université Paris-Saclay, Laboratoire d'Informatique Parallélisme Réseaux Algorithmes Distribués (LI-PaRAD), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)

Source: Proceedings of the 38th ACM International Conference on Supercomputing. :286-297

Subject Terms: [INFO.INFO-CC]Computer Science [cs]/Computational Complexity [cs.CC], [INFO.INFO-DC]Computer Science [cs]/Distributed, Information extraction, Natural language processing, [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS], [INFO.INFO-DS] Computer Science [cs]/Data Structures and Algorithms [cs.DS], Parallel, Distributed computing, Sparse matrix, Computing methodologies → Massively parallel algorithms, and Cluster Computing [cs.DC], Large-scale data analytics, Control methods Deep Learning, [INFO.INFO-DC] Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC], [INFO.INFO-CC] Computer Science [cs]/Computational Complexity [cs.CC], Co-occurrence matrix, Computing methodologies → Massively parallel algorithms Natural language processing Information extraction Control methods Deep Learning, Embedding

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Access URL: https://hal.science/hal-04719623v1
https://hal.science/hal-04719623v1/document
https://doi.org/10.1145/3650200.3656629

Automatic Loop Invariant Generation for Data Dependence Analysis

Authors: Tabar, Asmae Heydari, Bubel, Richard, Hahnle, Reiner

Source: 2022 IEEE/ACM 10th International Conference on Formal Methods in Software Engineering (FormaliSE) FORMALISE Formal Methods in Software Engineering (FormaliSE), 2022 IEEE/ACM 10th International Conference on. :34-45 May, 2022

Relation: 2022 IEEE/ACM 10th International Conference on Formal Methods in Software Engineering (FormaliSE)

IExchange: Asynchronous Communication and Termination Detection for Iterative Algorithms

Authors: Morozov, Dmitriy, Peterka, Tom, Guo, Hanqi, Raj, Mukund, Xu, Jiayi, Shen, Han-Wei

Source: 2021 IEEE 11th Symposium on Large Data Analysis and Visualization (LDAV) LDAV Large Data Analysis and Visualization (LDAV); 2021 IEEE 11th Symposium on. :12-21 Oct, 2021

Relation: 2021 IEEE 11th Symposium on Large Data Analysis and Visualization (LDAV)

GPU-based Image Compression for Efficient Compositing in Distributed Rendering Applications

Authors: Lipinksi, Riley, Moreland, Kenneth, Papka, Michael E., Marrinan, Thomas

Source: 2021 IEEE 11th Symposium on Large Data Analysis and Visualization (LDAV) LDAV Large Data Analysis and Visualization (LDAV); 2021 IEEE 11th Symposium on. :43-52 Oct, 2021

Relation: 2021 IEEE 11th Symposium on Large Data Analysis and Visualization (LDAV)

G-PICS: A Framework for GPU-Based Spatial Indexing and Query Processing

Authors: Lewis, Z., Tu, Y.

Source: IEEE Transactions on Knowledge and Data Engineering IEEE Trans. Knowl. Data Eng. Knowledge and Data Engineering, IEEE Transactions on. 34(3):1243-1257 Mar, 2022

GPU Algorithms for Fastest Path Problem in Temporal Graphs

Authors: Mithinti, Srikanth, Singh, Prashant, G, Ramakrishna

Source: Proceedings of the 53rd International Conference on Parallel Processing. :587-596

Availability: http://dl.acm.org/doi/10.1145/3673038.3673105

Benchmarking Inference of Transformer-Based Transcription Models With Clustering on Embedded GPUs

Authors: Marika E. Schubert, David Langerman, Alan D. George

Source: IEEE Access, Vol 12, Pp 123276-123293 (2024)

Subject Terms: Benchmarking, embedded hardware, speech recognition, transformers, Electrical engineering. Electronics. Nuclear engineering, massively parallel algorithms, TK1-9971

Access URL: https://doaj.org/article/9b3a3f1564d7460c894ab6ce1fb3819d

In Situ Visualization With Temporal Caching

Authors: DeMarle, D.E., Bauer, A.C.

Source: Computing in Science & Engineering Comput. Sci. Eng. Computing in Science & Engineering. 23(3):25-33 Jun, 2021

Hybrid TBETI domain decomposition for huge 2D scalar variational inequalities

Authors: Zdeněk Dostál, Marie Sadowská, David Horák, Jakub Kružík

Source: International Journal for Numerical Methods in Engineering. 125

Subject Terms: domain decomposition, BEM, massively parallel algorithms, variational inequality, hybrid TBETI-DP, scalability

Access URL: https://hdl.handle.net/11104/0359088

faimGraph: High Performance Management of Fully-Dynamic Graphs Under Tight Memory Constraints on the GPU

Authors: Winter, Martin, Mlakar, Daniel, Zayer, Rhaleb, Seidel, Hans-Peter, Steinberger, Markus

Source: SC18: International Conference for High Performance Computing, Networking, Storage and Analysis SC High Performance Computing, Networking, Storage and Analysis, SC18: International Conference for. :754-766 Nov, 2018

Relation: SC18: International Conference for High Performance Computing, Networking, Storage and Analysis

Comparing Binary-Swap Algorithms for Odd Factors of Processes

Authors: Moreland, Kenneth

Source: 2018 IEEE 8th Symposium on Large Data Analysis and Visualization (LDAV) Large Data Analysis and Visualization (LDAV), 2018 IEEE 8th Symposium on. :56-60 Oct, 2018

Relation: 2018 IEEE 8th Symposium on Large Data Analysis and Visualization (LDAV)

A Coordination Mechanism to Replicate Large-Scale Multi-agent Systems

Authors: Ductor, Sylvain, Guessoum, Zahia

Source: 2018 IEEE/ACM 13th International Symposium on Software Engineering for Adaptive and Self-Managing Systems (SEAMS) SEAMS Software Engineering for Adaptive and Self-Managing Systems (SEAMS), 2018 IEEE/ACM 13th International Symposium on. :130-136 May, 2018

Relation: 2018 IEEE/ACM 13th International Symposium on Software Engineering for Adaptive and Self-Managing Systems (SEAMS)

Density-Based clustering in mapReduce with guarantees on parallel time, space, and solution quality

Authors: Sepideh Aghamolaei, Mohammad Ghodsi

Source: Transactions on Combinatorics, Vol 14, Iss 3, Pp 135-156 (2024)

Subject Terms: massively parallel algorithms, range searching, unit disk graph, near neighbors, clustering, Mathematics, QA1-939

File Description: electronic resource

Relation: https://toc.ui.ac.ir/article_28264_25c4b7936d8b67c3489a676b9a960418.pdf; https://doaj.org/toc/2251-8657; https://doaj.org/toc/2251-8665

Access URL: https://doaj.org/article/3dd6ea04d1d64e14b54a0f5b42327c3b

Location-Sensitive String Problems in MPC

Authors: Jacob Gilbert, MohammadTaghi Hajiaghayi, Hamed Saleh, Saeed Seddighin

Source: Proceedings of the 35th ACM Symposium on Parallelism in Algorithms and Architectures. :101-111

Subject Terms: Suffix Trees, Massively Parallel Algorithms, 0202 electrical engineering, electronic engineering, information engineering, 0102 computer and information sciences, 02 engineering and technology, Data Structures, 01 natural sciences

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