Learning salient representation of crashes and near-crashes using supervised contrastive variational autoencoder.

Authors: Jiang B; Department of Statistics, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA., Guo F; Department of Statistics, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA; Virginia Tech Transportation Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA. Electronic address: feng.guo@vt.edu.

Source: Accident; analysis and prevention [Accid Anal Prev] 2025 Sep; Vol. 220, pp. 108148. Date of Electronic Publication: 2025 Jun 30.

Publication Type: Journal Article

Journal Info: Publisher: Pergamon Press Country of Publication: England NLM ID: 1254476 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-2057 (Electronic) Linking ISSN: 00014575 NLM ISO Abbreviation: Accid Anal Prev Subsets: MEDLINE

MeSH Terms: Accidents, Traffic*/statistics & numerical data , Accidents, Traffic*/prevention & control , Autoencoder* , Automobile Driving*, Humans ; Biomechanical Phenomena ; Deep Learning ; Safety

Autoencoder-Assisted Stacked Ensemble Learning for Lymphoma Subtype Classification: A Hybrid Deep Learning and Machine Learning Approach.

Authors: Ogundokun RO; Department of Computer Systems Engineering, Tshwane University of Technology (TUT), Pretoria 0001, South Africa., Owolawi PA; Department of Computer Systems Engineering, Tshwane University of Technology (TUT), Pretoria 0001, South Africa., Tu C; Department of Computer Systems Engineering, Tshwane University of Technology (TUT), Pretoria 0001, South Africa., van Wyk E; Department of Computer Systems Engineering, Tshwane University of Technology (TUT), Pretoria 0001, South Africa.

Source: Tomography (Ann Arbor, Mich.) [Tomography] 2025 Aug 18; Vol. 11 (8). Date of Electronic Publication: 2025 Aug 18.

Publication Type: Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101671170 Publication Model: Electronic Cited Medium: Internet ISSN: 2379-139X (Electronic) Linking ISSN: 23791381 NLM ISO Abbreviation: Tomography Subsets: MEDLINE

MeSH Terms: Autoencoder* , Ensemble Learning* , Lymphoma*/diagnostic imaging , Lymphoma*/classification , Lymphoma*/pathology, Humans ; Algorithms ; Deep Learning ; Machine Learning ; Principal Component Analysis ; Support Vector Machine

A Innovative Strategy for Identifying Subtypes Through the Analysis of Multi-Omics Data with Adversarial Autoencoders.

Authors: Chen X; Aeronautical Electronic Equipment Maintenance College, Changsha Aeronautical Vocational and Technical College, Changsha, China., Nie H; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., Chen Q; Hunan Skynet Digital Forensic Center, China., Zhang X; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., He Z; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., Chao X; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., Ou W; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., Fu X; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China., Chen H; College of Computer Science and Electronic Engineering, Hunan University, Changsha, China.

Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2025 Sep; Vol. 32 (9), pp. 879-895. Date of Electronic Publication: 2025 Jun 26.

Publication Type: Journal Article

Journal Info: Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-8666 (Electronic) Linking ISSN: 10665277 NLM ISO Abbreviation: J Comput Biol Subsets: MEDLINE

MeSH Terms: Autoencoder* , Genomics*/methods , Neoplasms*/genetics , Neoplasms*/classification, Humans ; Algorithms ; Computational Biology/methods ; Multiomics ; Generative Adversarial Networks

Sparse autoencoders uncover biologically interpretable features in protein language model representations.

Authors: Gujral O; Department of Mathematics, Massachusetts Institute of Technology, Cambridge, MA 02139.; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139., Bafna M; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139., Alm E; Center for Microbiome Informatics and Therapeutics, Massachusetts Institute of Technology, Cambridge, MA 02139.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139., Berger B; Department of Mathematics, Massachusetts Institute of Technology, Cambridge, MA 02139.; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139.

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2025 Aug 26; Vol. 122 (34), pp. e2506316122. Date of Electronic Publication: 2025 Aug 19.

Publication Type: Journal Article

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

MeSH Terms: Autoencoder* , Proteins*/chemistry , Proteins*/metabolism , Proteins*/genetics, Humans ; Computational Biology/methods ; Gene Ontology

A hybrid adversarial autoencoder-graph network model with dynamic fusion for robust scRNA-seq clustering.

Authors: Tang B; Key Laboratory of Maritime Intelligent Cyberspace Technology (Ministry of Education of China), Hohai University, 213200, Nanjing, China. bh.tang@hhu.edu.cn.; Shanghai Key Laboratory of Data Science, Fudan University, Shanghai, 200438, China. bh.tang@hhu.edu.cn.; BGI Research, Changzhou, Jiangsu, 213299, China. bh.tang@hhu.edu.cn., Feng Y; Key Laboratory of Maritime Intelligent Cyberspace Technology (Ministry of Education of China), Hohai University, 213200, Nanjing, China., Gao X; Key Laboratory of Maritime Intelligent Cyberspace Technology (Ministry of Education of China), Hohai University, 213200, Nanjing, China.

Source: BMC genomics [BMC Genomics] 2025 Aug 18; Vol. 26 (1), pp. 749. Date of Electronic Publication: 2025 Aug 18.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH Terms: Autoencoder* , RNA-Seq*/methods , Single-Cell Gene Expression Analysis*/methods, Humans ; Cluster Analysis

Analyzing crises in global financial indices using Recurrent Neural Network based Autoencoder.

Authors: Mim MA; Department of Computer Science and Telecommunication Engineering, Noakhali Science and Technology University, Noakhali, Bangladesh., Tuhin MKH; Department of Computer Science and Telecommunication Engineering, Noakhali Science and Technology University, Noakhali, Bangladesh.; Department of Computer Science and Engineering, Kishoreganj University, Kishoreganj, Bangladesh., Nobi A; Department of Computer Science and Telecommunication Engineering, Noakhali Science and Technology University, Noakhali, Bangladesh.

Source: PloS one [PLoS One] 2025 Jul 14; Vol. 20 (7), pp. e0326947. Date of Electronic Publication: 2025 Jul 14 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

MeSH Terms: Autoencoder* , Investments*/economics , Models, Economic* , Recurrent Neural Networks*, COVID-19/economics ; COVID-19/epidemiology ; Pandemics/economics

GAEDGRN: reconstruction of gene regulatory networks based on gravity-inspired graph autoencoders.

Authors: Wei PJ; Information Materials and Intelligent Sensing Laboratory of Anhui Province, Institute of Physical Science and Information Technology, Anhui University, 111 Jiulong Road, Hefei 230601, Anhui, China., Jin HW; School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei 230601, Anhui, China., Gao Z; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Computer Science and Technology, Anhui University, 111 Jiulong Road, Hefei 230601, Anhui, China., Su Y; School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei 230601, Anhui, China., Zheng CH; School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei 230601, Anhui, China.

Source: Briefings in bioinformatics [Brief Bioinform] 2025 May 01; Vol. 26 (3).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

MeSH Terms: Autoencoder* , Computational Biology*/methods , Gene Regulatory Networks* , Neural Networks, Computer*, Humans

ICVAE: Interpretable Conditional Variational Autoencoder for De Novo Molecular Design.

Authors: Fan X; School of Artificial Intelligence and Big Data, Henan University of Technology, Zhengzhou 450001, China., Fang S; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China., Li Z; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.; State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China., Ji H; Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China., Yue M; School of Artificial Intelligence and Big Data, Henan University of Technology, Zhengzhou 450001, China., Li J; School of Artificial Intelligence and Big Data, Henan University of Technology, Zhengzhou 450001, China., Ren X; School of Artificial Intelligence and Big Data, Henan University of Technology, Zhengzhou 450001, China.

Source: International journal of molecular sciences [Int J Mol Sci] 2025 Apr 23; Vol. 26 (9). Date of Electronic Publication: 2025 Apr 23.

Publication Type: Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE

MeSH Terms: Autoencoder* , Drug Design*, Algorithms ; Drug Discovery/methods ; Machine Learning

scAMZI: attention-based deep autoencoder with zero-inflated layer for clustering scRNA-seq data.

Authors: Yuan L; Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Provincial Key Laboratory of Industrial Network and Information System Security, Shandong Fundamental Research Center for Computer Science, 3501 Daxue Road, Jinan, 250353, China., Xu Z; Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Provincial Key Laboratory of Industrial Network and Information System Security, Shandong Fundamental Research Center for Computer Science, 3501 Daxue Road, Jinan, 250353, China., Meng B; Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, Jinan, 250353, China.; Shandong Provincial Key Laboratory of Industrial Network and Information System Security, Shandong Fundamental Research Center for Computer Science, 3501 Daxue Road, Jinan, 250353, China., Ye L; Cancer Center, The Second Hospital of Shandong University, 247 Beiyuan Street, Jinan, 250033, China. sdeyyelan@email.sdu.edu.cn.

Source: BMC genomics [BMC Genomics] 2025 Apr 07; Vol. 26 (1), pp. 350. Date of Electronic Publication: 2025 Apr 07.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH Terms: Autoencoder* , RNA-Seq*/methods , Sequence Analysis, RNA*/methods , Single-Cell Analysis*/methods , Software*, Humans ; Algorithms ; Cluster Analysis ; Computational Biology/methods ; Deep Learning ; Single-Cell Gene Expression Analysis

ECG Sensor Design Assessment with Variational Autoencoder-Based Digital Watermarking.

Authors: Hsu CY; School of Transportation, Fujian University of Technology, Fuzhou 350118, China., Chang CY; Department of Medical Informatics, Chung Shan Medical University, Taichung 40201, Taiwan., Chen YC; Department of Medical Informatics, Chung Shan Medical University, Taichung 40201, Taiwan., Wu J; Kang Chiao International School, Linkou Campus, New Taipei City 244, Taiwan., Chen ST; Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung City 807618, Taiwan.

Source: Sensors (Basel, Switzerland) [Sensors (Basel)] 2025 Apr 05; Vol. 25 (7). Date of Electronic Publication: 2025 Apr 05.

Publication Type: Evaluation Study; Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101204366 Publication Model: Electronic Cited Medium: Internet ISSN: 1424-8220 (Electronic) Linking ISSN: 14248220 NLM ISO Abbreviation: Sensors (Basel) Subsets: MEDLINE

MeSH Terms: Autoencoder* , Electrocardiography*/methods , Electrocardiography*/instrumentation , Signal Processing, Computer-Assisted*, Humans ; Computer Security

NaMA-Mamba: Foundation model for generalizable nasal disease detection using masked autoencoder with Mamba on endoscopic images.

Authors: Wang W; Academy for Engineering and Technology, Fudan University, Shanghai, 200433, China; Shanghai Key Laboratory of Medical Image Computing and Computer Assisted Intervention, Shanghai, 200032, China. Electronic address: 22210860059@m.fudan.edu.cn., Jin Z; Academy for Engineering and Technology, Fudan University, Shanghai, 200433, China; Shanghai Key Laboratory of Medical Image Computing and Computer Assisted Intervention, Shanghai, 200032, China. Electronic address: 23210860048@m.fudan.edu.cn., Liu X; Eye & ENT Hospital of Fudan University, Shanghai, 200031, China. Electronic address: liuxueli@fudan.edu.cn., Chen X; Academy for Engineering and Technology, Fudan University, Shanghai, 200433, China; Shanghai Key Laboratory of Medical Image Computing and Computer Assisted Intervention, Shanghai, 200032, China. Electronic address: chenxinrong@fudan.edu.cn.

Source: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society [Comput Med Imaging Graph] 2025 Jun; Vol. 122, pp. 102524. Date of Electronic Publication: 2025 Mar 12.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Science Country of Publication: United States NLM ID: 8806104 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0771 (Electronic) Linking ISSN: 08956111 NLM ISO Abbreviation: Comput Med Imaging Graph Subsets: MEDLINE

MeSH Terms: Artificial Intelligence* , Autoencoder* , Endoscopy*/methods , Image Interpretation, Computer-Assisted*/methods , Nose Diseases*/diagnostic imaging, Humans ; Algorithms ; Machine Learning

Autoencoder techniques for survival analysis on renal cell carcinoma.

Authors: Sanz Ilundain I; Complutense University of Madrid, Madrid, Spain., Hernández-Lorenzo L; Complutense University of Madrid, Madrid, Spain., Rodríguez-Antona C; CSIC/UAM, Madrid, Spain., García-Donas J; HM CIOCC Madrid, Hospital Universitario HM Sanchinarro, HM Hospitales, Madrid, Spain., Ayala JL; Complutense University of Madrid, Madrid, Spain.

Source: PloS one [PLoS One] 2025 May 15; Vol. 20 (5), pp. e0321045. Date of Electronic Publication: 2025 May 15 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

MeSH Terms: Autoencoder* , Carcinoma, Renal Cell*/genetics , Carcinoma, Renal Cell*/mortality , Carcinoma, Renal Cell*/drug therapy , Carcinoma, Renal Cell*/pathology , Kidney Neoplasms*/genetics , Kidney Neoplasms*/mortality , Kidney Neoplasms*/drug therapy , Kidney Neoplasms*/pathology, Humans ; Antibodies, Monoclonal, Humanized/therapeutic use ; Axitinib/therapeutic use ; Immunotherapy ; Progression-Free Survival ; Proportional Hazards Models ; Sunitinib/therapeutic use ; Survival Analysis ; Transcriptome

Discrete variational autoencoders BERT model-based transcranial focused ultrasound for Alzheimer's disease detection.

Authors: Thipparthy KR; Department of Computer science, Fairleigh Dickinson University, Teaneck, USA. Electronic address: kthipparthy@gmail.com., Kollu A; Department of Computer Engineering, PCET Pimpri Chinchwad College of Engineering and Research, Pune, India. Electronic address: kadarchna@gmail.com., Kulkarni C; Department of Computer Engineering, VPKBIET, Baramati, Maharashtra, India. Electronic address: chaitanya.kulkarni@vpkbiet.org., Dutta AK; Department of Computer Science and Information Systems, College of Applied Sciences, AlMaarefa University, Ad Diriyah, Riyadh 13713, Kingdom of Saudi Arabia. Electronic address: adotta@um.edu.sa., Doshi H; Marwadi University Research Center, Department of Computer Engineering, Faculty of Engineering & Technology, Marwadi University, Rajkot, Gujarat 360003, India. Electronic address: hardik.doshi@marwadieducation.edu.in., Kashyap A; Department of Computer Science and Engineering, Graphic Era Hill University, Dehradun, India; Graphic Era Deemed to be University, Dehradun, Uttarakhand 248002, India. Electronic address: aditya_kashyap2024@outlook.com., Sinha KP; Department of Computer Science and Engineering, Nalanda College of Engineering, Chandi Bihar Engineering University, Patna, India. Electronic address: priyankasinha2008@gmail.com., Kondaveeti SB; Dept of Biochemistry, Symbiosis Medical College for Women, Symbiosis International (Deemed University), Pune, India. Electronic address: ksuresh.babu@smcw.siu.edu.in., Gupta R; Chitkara University Institute of Engineering and Technology, Chitkara University, Punjab, India. Electronic address: rupesh.gupta@chitkara.edu.in.

Source: Journal of neuroscience methods [J Neurosci Methods] 2025 Apr; Vol. 416, pp. 110386. Date of Electronic Publication: 2025 Feb 03.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier/North-Holland Biomedical Press Country of Publication: Netherlands NLM ID: 7905558 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1872-678X (Electronic) Linking ISSN: 01650270 NLM ISO Abbreviation: J Neurosci Methods Subsets: MEDLINE

MeSH Terms: Alzheimer Disease*/diagnosis , Alzheimer Disease*/diagnostic imaging , Alzheimer Disease*/physiopathology , Autoencoder* , Transcranial Magnetic Stimulation*/methods, Aged ; Female ; Humans ; Male ; Speech/physiology

FactVAE: a factorized variational autoencoder for single-cell multi-omics data integration analysis.

Authors: Wang L; School of Computer Science and Engineering, Northeastern University, 110819, Shenyang, China., Zhang H; School of Computer Science and Engineering, Northeastern University, 110819, Shenyang, China., Yi B; School of Computer Science and Engineering, Northeastern University, 110819, Shenyang, China., Xie W; School of Computer Science and Engineering, Northeastern University, 110819, Shenyang, China., Yu K; College of Medicine and Bioinformation Engineering, Northeastern University, 110819, Shenyang, China., Li W; Key Laboratory of Intelligent Computing in Medical Image (MIIC), Northeastern University, 110000, Shenyang, China.; National Frontiers Science Center for Industrial Intelligence and Systems Optimization, Northeastern University, 110819, Shenyang, China., Li K; Department of Computer Science, State University of New York, Albany, NY 12561, United States., Zhao D; School of Computer Science and Engineering, Northeastern University, 110819, Shenyang, China.

Source: Briefings in bioinformatics [Brief Bioinform] 2025 Mar 04; Vol. 26 (2).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

MeSH Terms: Autoencoder* , Computational Biology*/methods , Multiomics*/methods , Single-Cell Analysis*/methods, Humans ; Algorithms ; Neural Networks, Computer ; Software

Spatiotemporal multi-feature fusion vehicle trajectory anomaly detection for intelligent transportation: An improved method combining autoencoders and dynamic Bayesian networks.

Authors: Qiu M; School of Mathematics and Statistics, Wuhan University of Technology, Wuhan, Hubei, 430070, China., Mao S; School of Mathematics and Statistics, Wuhan University of Technology, Wuhan, Hubei, 430070, China., Zhu J; School of Management, Wuhan University of Technology, Wuhan, Hubei, 430070, China. Electronic address: jbzhu@whut.edu.cn., Yang Y; School of Computer Science and Informatics, De Montfort University, Leicester LE1 9BH, UK.

Source: Accident; analysis and prevention [Accid Anal Prev] 2025 Mar; Vol. 211, pp. 107911. Date of Electronic Publication: 2025 Jan 03.

Publication Type: Journal Article

Journal Info: Publisher: Pergamon Press Country of Publication: England NLM ID: 1254476 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-2057 (Electronic) Linking ISSN: 00014575 NLM ISO Abbreviation: Accid Anal Prev Subsets: MEDLINE

MeSH Terms: Autonomous Vehicles* , Autoencoder* , Accidents, Traffic*/prevention & control, Bayes Theorem ; Time Factors ; Models, Statistical ; China

amVAE: Age-aware multimorbidity clustering using variational autoencoders.

Authors: Holm NN; Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark. Electronic address: nnho@dtu.dk., Le TM; Applied Artificial Intelligence Institute, Deakin University, Geelong, Australia., Frølich A; Innovation and Research Centre for Multimorbidity, Slagelse Hospital, Slagelse, Denmark; Department of Public Health, University of Copenhagen, Copenhagen, Denmark., Andersen O; Department of Clinical Research, Copenhagen University Hospital Amager and Hvidovre, Hvidovre, Denmark; Department of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark; Emergency Department, Copenhagen University Hospital Amager and Hvidovre, Hvidovre, Denmark., Juul-Larsen HG; Department of Clinical Research, Copenhagen University Hospital Amager and Hvidovre, Hvidovre, Denmark., Stockmarr A; Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark., Venkatesh S; Applied Artificial Intelligence Institute, Deakin University, Geelong, Australia.

Source: Computers in biology and medicine [Comput Biol Med] 2025 Mar; Vol. 186, pp. 109632. Date of Electronic Publication: 2025 Jan 16.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: United States NLM ID: 1250250 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0534 (Electronic) Linking ISSN: 00104825 NLM ISO Abbreviation: Comput Biol Med Subsets: MEDLINE

MeSH Terms: Autoencoder* , Heart Diseases*/epidemiology , Multimorbidity*, Adult ; Aged ; Aged, 80 and over ; Female ; Humans ; Male ; Middle Aged ; Cluster Analysis ; Denmark/epidemiology

Design and use of a Denoising Convolutional Autoencoder for reconstructing electrocardiogram signals at super resolution.

Authors: Lomoio U; Department of Surgical and Medical Sciences, Magna Graecia University of Catanzaro, Italy. Electronic address: ugo.lomoio@unicz.it., Veltri P; DIMES, University of Calabria, Rende, Italy. Electronic address: pierangelo.veltri@dimes.unical.it., Guzzi PH; Department of Surgical and Medical Sciences, Magna Graecia University of Catanzaro, Italy. Electronic address: hguzzi@unicz.it., Liò P; Department of Computer Science and Technology, Cambridge University, Cambridge, United Kingdom. Electronic address: pl219@cam.ac.uk.

Source: Artificial intelligence in medicine [Artif Intell Med] 2025 Feb; Vol. 160, pp. 103058. Date of Electronic Publication: 2024 Dec 28.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Science Publishing Country of Publication: Netherlands NLM ID: 8915031 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-2860 (Electronic) Linking ISSN: 09333657 NLM ISO Abbreviation: Artif Intell Med Subsets: MEDLINE

MeSH Terms: Autoencoder* , Electrocardiography*/methods , Signal Processing, Computer-Assisted*, Humans ; Algorithms ; Signal-To-Noise Ratio

EEG-to-EEG: Scalp-to-Intracranial EEG Translation Using a Combination of Variational Autoencoder and Generative Adversarial Networks.

Authors: Abdi-Sargezeh B; Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX1 2JD, UK., Shirani S; Department of Clinical Neuroscience, King's College London, London WC2R 2LS, UK., Valentin A; Department of Clinical Neuroscience, King's College London, London WC2R 2LS, UK., Alarcon G; School of Medical Sciences, University of Manchester, Manchester M13 9PL, UK., Sanei S; Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK.

Source: Sensors (Basel, Switzerland) [Sensors (Basel)] 2025 Jan 16; Vol. 25 (2). Date of Electronic Publication: 2025 Jan 16.

Publication Type: Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101204366 Publication Model: Electronic Cited Medium: Internet ISSN: 1424-8220 (Electronic) Linking ISSN: 14248220 NLM ISO Abbreviation: Sensors (Basel) Subsets: MEDLINE

MeSH Terms: Autoencoder* , Electroencephalography*/methods , Scalp*/physiology, Humans ; Algorithms ; Brain/physiology ; Epilepsy/physiopathology ; Generative Adversarial Networks ; Neural Networks, Computer ; Signal Processing, Computer-Assisted

Unveiling patterns in spatial transcriptomics data: a novel approach utilizing graph attention autoencoder and multiscale deep subspace clustering network.

Authors: Zhou L; School of Computer Science, Hunan University of Technology, Zhuzhou 412007, Hunan, China., Peng X; School of Computer Science, Hunan University of Technology, Zhuzhou 412007, Hunan, China., Chen M; School of Computer Science, Hunan Institute of Technology, Hengyang 421002, Hunan, China., He X; School of Computer Science, Hunan University of Technology, Zhuzhou 412007, Hunan, China., Tian G; Geneis (Beijing) Co. Ltd., Beijing 100102, China., Yang J; Geneis (Beijing) Co. Ltd., Beijing 100102, China., Peng L; School of Computer Science, Hunan University of Technology, Zhuzhou 412007, Hunan, China.; College of Life Science and Chemistry, Hunan University of Technology, Zhuzhou 412007, Hunan, China.

Source: GigaScience [Gigascience] 2025 Jan 06; Vol. 14.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 101596872 Publication Model: Print Cited Medium: Internet ISSN: 2047-217X (Electronic) Linking ISSN: 2047217X NLM ISO Abbreviation: Gigascience Subsets: MEDLINE

MeSH Terms: Autoencoder* , Computational Biology*/methods , Gene Expression Profiling*/methods , Transcriptome*, Animals ; Humans ; Mice ; Algorithms ; Cluster Analysis ; Software

Towards prediction of pseudo-normal SPECT image data using variational autoencoder.

Authors: Dudasova K; Czech Technical University in Prague, Faculty of Nuclear Sciences and Physical Engineering, Prague, Czech Republic. katerina.dudasova7@gmail.com.; National Radiation Protection Institute, Prague, Czech Republic. katerina.dudasova7@gmail.com., Trnka J; Department of Medical Physics, General University Hospital in Prague, Prague, Czech Republic.

Source: Nuclear medicine review. Central & Eastern Europe [Nucl Med Rev Cent East Eur] 2025; Vol. 28, pp. 9-17.

Publication Type: Journal Article

Journal Info: Publisher: Via Medica Country of Publication: Poland NLM ID: 100886103 Publication Model: Print Cited Medium: Internet ISSN: 1644-4345 (Electronic) Linking ISSN: 15069680 NLM ISO Abbreviation: Nucl Med Rev Cent East Eur Subsets: MEDLINE

MeSH Terms: Autoencoder* , Image Processing, Computer-Assisted*/methods , Tomography, Emission-Computed, Single-Photon*, Humans ; Brain/diagnostic imaging ; Tropanes